Pairwise Alignments

Query, 309 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 74/280 (26%), Positives = 113/280 (40%), Gaps = 42/280 (15%)

Query: 1   MMNEEALGWVIRTRDPEFD--DWDAFTIWLEGDPARATAYDALMAADADLADMVPAEPIV 58
           ++  +A  W +R         D DAF  W+    A A A+  +M   + L      +P++
Sbjct: 12  LLQRQAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREVMRTWSAL------DPLL 65

Query: 59  MPVAANDAGERHRRPLRWIG--------------GGAIAAALVAAV-----------SVG 93
              AA  A       LR +               GGA+AA++ A V           SVG
Sbjct: 66  AEEAARQASRAGTLSLRGLSAALGLHSPGRRAFLGGAVAASVTAGVMALDPPLGLWPSVG 125

Query: 94  LLNRSDIYSITTRPGETRSIALDDGTRIELNGGTTLRLDRKNA--RFAALDAGEAAFTVR 151
            L         T  GE R +AL  G  + +N  T +     +A  R   L AGEA     
Sbjct: 126 DLTAD----YRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGEAEIAA- 180

Query: 152 HDAADPFRVTVGDAVFEDAGTVFNIVHSGNATRIGVSEGKVIYNPQAEAISLPAGRALSD 211
            + A  F V  G          FNI H+G    +   +G++  +   E  +L AGR ++ 
Sbjct: 181 -NGASDFLVETGGGRLVARSARFNIRHTGPQVCVTCLDGRLTVSVNGEQRALEAGRQVTF 239

Query: 212 GAEGLRVMDVAPQA-VASWRQGQLIYANAPVGDVTQDIAR 250
              GL+ +  A +A V++WR G L +   P+ +V  +I R
Sbjct: 240 DRAGLQEVVRADEASVSTWRTGVLSFDRMPLAEVIDEINR 279