Pairwise Alignments

Query, 404 a.a., Integrase from Sphingobium sp. HT1-2

Subject, 412 a.a., Prophage integrase IntS from Xanthobacter sp. DMC5

 Score =  396 bits (1018), Expect = e-115
 Identities = 209/401 (52%), Positives = 273/401 (68%), Gaps = 6/401 (1%)

Query: 1   MLTTIQINALKPREKPYKVADAKGLYILVNPNGSLLWRVKFRFHGIEKKMALGRYPDVGL 60
           MLT   I A KP+EKPYK++DA+GL++LV P G  LWR+ +RF G ++++  G Y  V L
Sbjct: 1   MLTDTAIKAAKPKEKPYKLSDAEGLHLLVTPQGGKLWRLAYRFGGKQRQLTFGSYKYVTL 60

Query: 61  KEARQKRDEAREQLEGGVDPLAARIQAKIE---AEAAARTTFRVVTDEFIEKMEREGKAP 117
            EAR++R EA+  L  GVDP A     K E   AE AA+ TF VV  EFIEK+ +EG+AP
Sbjct: 61  AEARERRTEAKRLLASGVDPGANIKSRKAEQRAAEEAAQNTFGVVASEFIEKIRKEGRAP 120

Query: 118 ATLKKMRWFRDELQPTIGHRPIAEISAHELLNALKRFERKGHFESAIRARSFSGRVFRYA 177
           AT++K  W    +   +  RPI+EI+A E+L+ L+  E KG+ E+A RARS  GRV RYA
Sbjct: 121 ATMEKAEWLLRTIAAPLADRPISEITAREVLDVLRHVEAKGNHEAARRARSTIGRVLRYA 180

Query: 178 VATLRAQHNPADILRGALITPKVKHHAALLEPAKVGELLRAIDGYG-GKIETRIALQLAP 236
           +AT RA+ +    L+GALI P V+H AA+ E   +G+L+ AI G+  G+  T  AL+L  
Sbjct: 181 IATDRAERDVTSDLKGALIAPPVQHRAAITEEKALGKLMAAIYGWNRGQPTTVAALKLLA 240

Query: 237 HVYLRPGELRKAEWGEIDFDAAVWRVPAGRTKMRKPHAVPLSTQVVTLLRELRAMGNLG- 295
            + LRPGE+R A W EID + AVW +PAGRTKMR+ H  PL  Q V +L+ LR + + G 
Sbjct: 241 MLALRPGEVRAARWSEIDLEKAVWIIPAGRTKMRRQHRTPLPRQAVEVLKALRPVTDRGP 300

Query: 296 -SYLFPANSTFLKPICENTLNVALRRLGFTRDEMTSHGFRSIASTLLNESGLWHPDAIER 354
            S +F A ++ LKPI ENTLNVA+RRLGFT  EMTSHGFR+  +TL NES  WHPDAIER
Sbjct: 301 DSLVFHATTSVLKPISENTLNVAIRRLGFTASEMTSHGFRAAFATLANESRKWHPDAIER 360

Query: 355 SLAHRERDSVRAAYHRGAHWEERVRMAQWWSDYLCKLRDGA 395
            LAH E ++VR AY RG HWEER+ + QWW+D+L +LR  A
Sbjct: 361 QLAHVEGNNVRRAYTRGEHWEERITLMQWWADHLDRLRKDA 401