Pairwise Alignments

Query, 184 a.a., RNA polymerase ECF-type sigma factor from Sphingobium sp. HT1-2

Subject, 186 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

 Score = 52.0 bits (123), Expect = 6e-12
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 32  RFLRARGAGEDAEDLLQDMWMKLEA-KDLGPVADPLPYLYRMANNLMLDRYRSATRRERR 90
           R  R  G+ + A+D+L + W+++    D GPVA P+ YL R+A+N+  DR R A  R   
Sbjct: 24  RLRRRFGSDDVADDVLHETWLRVNRMSDPGPVASPMAYLLRIASNVAEDR-RIANGRLLD 82

Query: 91  EQDWAEGAGGVMADPNDDLAVDERMILNQRLEQARGILADLGPRVELVFRRFRIEGVGQR 150
             +  E       D  D   V E     Q LE+A   L +L  R   +F   R++    +
Sbjct: 83  FVE-VEELLHFADDSRDPARVSEARSEVQALERA---LEELPRRRREIFLASRVDETPHK 138

Query: 151 LIAEELGVSLTTVEKDLQKA 170
            IA   GVS+  VE++++ A
Sbjct: 139 DIALRYGVSVRIVEREVKAA 158