Pairwise Alignments

Query, 184 a.a., RNA polymerase ECF-type sigma factor from Sphingobium sp. HT1-2

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 55.5 bits (132), Expect = 5e-13
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 14/152 (9%)

Query: 32  RFLRARGAGEDAEDLLQDMWMKLEAKDLGPVADPLPYLYRMANNLMLDRYRSATRRERRE 91
           R LR+R   + AEDL  D ++++       V  P  YL++ A N+ +D +R   RR+  E
Sbjct: 20  RKLRSR---QQAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAVDGFRREDRRQALE 76

Query: 92  QD-WAEGAGGVMADPNDDLAVDERMILNQRLEQARGILADLGPRVELVFRRFRIEGVGQR 150
           ++ + EGA G      D  A    + L   +E+A   LA+L      VF   ++EG+ Q 
Sbjct: 77  REAFEEGATG----SGDPEAYVHALELADSVERA---LAELPLNCRQVFIWQKLEGLTQA 129

Query: 151 LIAEELGVSLTTVEKDLQKAYRAMLALKQSLD 182
            IAE +G+S   VEK +    R +  L++ LD
Sbjct: 130 EIAERMGLSKNMVEKYM---IRTLRHLREHLD 158