Pairwise Alignments

Query, 401 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily from Sphingobium sp. HT1-2

Subject, 388 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 100/379 (26%), Positives = 160/379 (42%), Gaps = 41/379 (10%)

Query: 15  AGMDPDRLDALVDHLDRTYVQSGKLPHMQMLVSRDEVPLLSVSRGQA-RASGEPLQADAL 73
           AG D DR  A V+   R  V+SG      + V+R     L  + G + R +G  ++ DA+
Sbjct: 5   AGFD-DRALARVEAAIRADVESGIYDGAVIKVARHGQIALDATIGFSNRRAGAAMREDAV 63

Query: 74  FRIASMTKPVTSVAFMRLVEQGKVALDDPVTDVLPEFADLRVGADGRGRMTRPMRMIDLL 133
           F++ S+TK  T+   +  ++ G ++L   V DV+PEF    +   GR      + +  LL
Sbjct: 64  FKVLSLTKAFTTTLVLEAIDLGLLSLTTRVVDVIPEFWGRDLFRSGR---KERVNVGHLL 120

Query: 134 RHTSGLTYGLQRQTPIDACYRELGLDEFQQKRSSDEFIAALASLPLEFSPGERWNYG--V 191
            H +GL+      TP    Y +L         +  E I A+ +L +   PG+ +NY   V
Sbjct: 121 THRAGLS-----PTPQPLPYDQL--------HNFSETIQAICALDVVGEPGKAFNYSPTV 167

Query: 192 STDVLGVIVERLSG-QDLETHFRQNIFDPLGMKDSFFTLPEDRTDRLTDAWGLGEDG--L 248
           +  +LG +V R+ G   L     Q +F  LGM  +         DRL        +G  L
Sbjct: 168 NHALLGEMVRRVHGAASLAELMDQRLFSRLGMSSTSLGPTSQIRDRLVPLTSDFPEGGWL 227

Query: 249 RLRDRGAASSWRRKLRFRSGGGGLISSTADYHRFARMLLRGGELDGARLLQPDTVAQMRS 308
              D  A +        +    G ++S  D   FA ML   G +   R+L P  V +  +
Sbjct: 228 TNADIKAVADAIEAPNSQMPWVGAMTSAQDVFVFAEMLREQGTVRDERILSPAVVRKATT 287

Query: 309 NHLPGGGDLASMSQAMFSEA---DYAGVGFGLGFAM-----------TLANQQFYWG-GV 353
                 GD  +    + ++A   D      GLGFA+           TL +   +   G 
Sbjct: 288 LQT---GDAINDLYKLLADARHWDLPAGNMGLGFALGGDGLTVSQFGTLTSPGTFGNFGA 344

Query: 354 FSTYFFIDPVERLIGLFMT 372
            ST F++DP  ++  + +T
Sbjct: 345 GSTLFWVDPESQITFVCLT 363