Pairwise Alignments

Query, 401 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily from Sphingobium sp. HT1-2

Subject, 434 a.a., putative beta-lactamase (VIMSS) from Escherichia coli BW25113

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 104/424 (24%), Positives = 164/424 (38%), Gaps = 100/424 (23%)

Query: 6   VTDAAAARAAGMDPDRLDALVDHLDRTYVQSGKLPHMQMLVSRDEVPLLSVSRGQARASG 65
           V   ++   AG + +RL+ + D      V  G  P + +L+ +D   +   + G A+   
Sbjct: 24  VLTESSPEKAGFNVERLNQM-DRWISQQVDVG-YPSVNLLIIKDNQIVYRKAWGAAKKYD 81

Query: 66  ------EPLQADA--LFRIASMTKP-VTSVAFMRLVEQGKVALDDPVTDVLPEFADLRVG 116
                 +P++A    L+ +AS TK   T+ A  +L+ +GK+  DD +   +P FAD    
Sbjct: 82  GSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFAD-SPN 140

Query: 117 ADGRGRMTRPMRMIDLLRHTSGLTYGLQRQTPIDACYRELGLDEFQQKRSSDEFIAALAS 176
              +G+ T  +R+ DLL H+ G         P D  Y    +      +   + +  +  
Sbjct: 141 DTIKGKNT--LRISDLLHHSGGF--------PADPQYPNKAVAGALYSQDKGQTLEMIKR 190

Query: 177 LPLEFSPGERWNYG-VSTDVLGVIVERLSGQDLETHFRQNIFDPLGM------------- 222
            PLE+ PG +  Y  V   +LG IVE ++GQ L+ +  ++I+ PLG+             
Sbjct: 191 TPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFK 250

Query: 223 -------------KDSFFTLPEDRTDRLTDAWGLGEDGLRLRDRGAASSWRRKLRFRSGG 269
                        +D     P  RT  L   WG   D       G            SG 
Sbjct: 251 PQQIAATELNGNTRDGVIHFPNIRTSTL---WGQVHDEKAFYSMGGV----------SGH 297

Query: 270 GGLISSTADYHRFARMLLRGGELDGARLLQPDTVAQMRSNHLPGGGDLASMSQAMFSEAD 329
            GL S+T D     + +L GG     +L   +TV                    MF+ + 
Sbjct: 298 AGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETV-------------------KMFTTSS 338

Query: 330 YAGVGFGLGFAM-----------TLANQQFY----WGGVFSTYFFIDPVERLIGLFMTQH 374
                FGLG+ +           TLA+ Q Y    W G   T   IDPV  +  + M  +
Sbjct: 339 KEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTG---TVTVIDPVNHMT-IVMLSN 394

Query: 375 LPSS 378
            P S
Sbjct: 395 KPHS 398