Pairwise Alignments

Query, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 81.3 bits (199), Expect = 9e-21
 Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 13/155 (8%)

Query: 12  LPALMRYARRLTGNESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSILHNVFVSGTRR 71
           + ++  +A RLT +E DA+DLVQD  ++AY   +S+++G   + WLF IL N F++  R+
Sbjct: 26  IDSMYNFAFRLTFDEDDAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKNSFINEYRK 85

Query: 72  AA----------VRERFRADAVAQ--AEPVAAPAQEQMVRLHQIEAALTALPEEQQTVLH 119
            +          V   + +D+V       +   A + M+   +I  AL +L  + +TV+ 
Sbjct: 86  KSKQPSKVDYQEVETYYNSDSVDYNITSDLRVDAVKDMLG-DEISNALNSLAVDFRTVII 144

Query: 120 LVAVEGLSYQDAADAIGIPIGTLISRLSRARAKLR 154
           L  +EG +Y++ A  + IPIGT+ SRL RAR  L+
Sbjct: 145 LCDLEGFTYEEMAKILDIPIGTVRSRLHRARNLLK 179