Pairwise Alignments

Query, 541 a.a., Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site from Sphingobium sp. HT1-2

Subject, 556 a.a., choline dehydrogenase (NCBI) from Escherichia coli BW25113

 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 449 DPLISSHAIGGYHHMGTTRMATDPRQGVVDADGRVHGQANLYVVGSSIFPTSSWANPTLT 508
           D  + +HA   +H  GT +M  D    VVD +GRVHG   L VV +SI P     N   T
Sbjct: 461 DEFVRNHAETAFHPCGTCKMGYD-EMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNAT 519

Query: 509 IAALALRTADRL 520
              +  + AD +
Sbjct: 520 TIMIGEKIADMI 531



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 17 DVCVIGAGAAGITTARRLLAAGH-QVLLLESGGLDY 51
          D  +IGAG+AG   A RL    +  VLLLE+GG DY
Sbjct: 4  DYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDY 39