Pairwise Alignments

Query, 179 a.a., Integrase from Sphingobium sp. HT1-2

Subject, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 36  YGYRRVTALLCHAGWTVNHKRVERIWRREGL-----KVPLRQPKRGRL---WLNDGSCIR 87
           YG R++   L + G  VN KRV R+ R  GL     K    +P +G     +L  G    
Sbjct: 53  YGVRQMAWHLQNEGHPVNVKRVRRLMRLMGLMPIYQKPNTSKPAKGHKTYPYLLRG---- 108

Query: 88  LRPEYPGHVWAYDFVEGRTHDGRKFRILTIIDEASRECLALIVARQLKHEDVLAALADLF 147
           LR + P  VW  D        G  + ++ I+D A+R+ LA  ++  L+ +  +  L +  
Sbjct: 109 LRIDRPNQVWCADITYLPMRRGFLY-LIAIMDWATRKVLAWRISNTLEADFCVEVLNEAI 167

Query: 148 ISRGPPVHIRSD 159
           +  GPP  + +D
Sbjct: 168 LRFGPPEIMNTD 179