Pairwise Alignments

Query, 179 a.a., Integrase from Sphingobium sp. HT1-2

Subject, 309 a.a., IS3 family transposase from Agrobacterium fabrum C58

 Score = 72.4 bits (176), Expect = 7e-18
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 3/132 (2%)

Query: 29  LAKQYGRYGYRRVTALLCHAGWTVNHKRVERIWRREGLKVPLRQPKRGRLWLNDGSCIRL 88
           LA +  R+GYRR+  LL   G      R+ R++R EGL V  R+ +R  +       +  
Sbjct: 55  LANERRRFGYRRLFILLRRDGEPSGVNRIYRLYREEGLSVRKRKARRRAVGTRAPILVEA 114

Query: 89  RPEYPGHVWAYDFVEGRTHDGRKFRILTIIDEASRECLALIVARQLKHEDVLAALADLFI 148
           +       W+ DFV  +   GR+FR+L I+D+ +RECLA I    +    V   L  L  
Sbjct: 115 KANAR---WSLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGRRVARELTALIP 171

Query: 149 SRGPPVHIRSDN 160
            RG P  I SDN
Sbjct: 172 RRGKPGVIVSDN 183