Pairwise Alignments

Query, 312 a.a., putative membrane protein from Sphingobium sp. HT1-2

Subject, 335 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 77/301 (25%), Positives = 121/301 (40%), Gaps = 58/301 (19%)

Query: 13  DATAAQPSTPGAKLRAAREAQGLSVQDIATRTRIAQRQLEAIERDDYGALPGIPYAVGFA 72
           +   A    PG  LR ARE +  S  ++A +  +    L  +E   +  LPG  +A G+ 
Sbjct: 7   EVAVAPGQNPGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHTFARGYI 66

Query: 73  RAYARAIDLDEVAIAADVRNAVHNSDMGATRYEAFEPADPARVPSRTLAWTAAVIGIIVI 132
           RAYA+ +DLD+ A+             G+  +      +P R+    L   + ++ + V+
Sbjct: 67  RAYAKLMDLDQAALVDAFDRYTGTHAKGSDVHSLGRIEEPVRLSHNILRGVSLLLLVAVV 126

Query: 133 -AGFTIWRTQLLTPPTGEEIAEQQAEKPAAAPKAGVQAPIAAPVTGPVVFTANDDVWMRI 191
             GF  W+ Q      G+E+A+   E                      V +A+    +  
Sbjct: 127 GGGFFWWQDQ--GSLRGKELAKIALEHVE-------------------VESADGTTQIHP 165

Query: 192 VDEAGERLKDGLLKKGESFTLPAGARNPTILTGRPQALDVTVGGKAIPPLGAADRTIA-- 249
           +DE     +D  +  G+    P  A         P AL+           GAA++  A  
Sbjct: 166 LDEP----EDQAVSAGQQ---PESA---------PLALE----------QGAAEQPAAAE 199

Query: 250 DVPVSAEALLARAAAPAGAPAGAPAPAGQPSRAPTTPAGGQGSVPTSAAPPPPTAAPQPS 309
             PVS+EA +A A     APA +PAP   P +A   PA        + AP P  AA +P+
Sbjct: 200 QAPVSSEATIATAPVQP-APAASPAPVTPPVQATAAPA-------PAPAPAPAVAAVEPA 251

Query: 310 A 310
           A
Sbjct: 252 A 252



 Score = 33.9 bits (76), Expect = 6e-06
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 143 LTPPTGEEIAEQQAEKPAAAPKAGVQAPIAAPVTGPVV---FTANDDVWMRIVDEAGERL 199
           +TPP     A   A  PA AP      P A P     V   FTA  D W ++ D  G+ L
Sbjct: 225 VTPPVQATAAPAPA--PAPAPAVAAVEPAAVPAGSAKVAIQFTA--DCWTQVSDGNGKVL 280

Query: 200 KDGLLKKGESFTLPAGARNPTILTGRPQALDVTVGGKAI 238
              + +KG++  L  G     +  G  +   V+  G+A+
Sbjct: 281 FSAIKRKGDNLEL-TGKPPFAVRLGFARGAQVSYNGQAV 318