Pairwise Alignments

Query, 478 a.a., sigma-54 dependent DNA-binding response regulator from Sphingobium sp. HT1-2

Subject, 445 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Enterobacter asburiae PDN3

 Score =  277 bits (709), Expect = 5e-79
 Identities = 165/462 (35%), Positives = 248/462 (53%), Gaps = 36/462 (7%)

Query: 9   LMLIDDEPAQRRLVSALAARAGWRTIFASDAETALATLGTQDGIQLDAVLIDQWSPDFDP 68
           L+L+DD+P   +L+       G+  + A   +  L  L  +   ++D V+ D    + D 
Sbjct: 9   LLLVDDDPGLLKLLGMRLVSEGYSVVTAESGQEGLKILTRE---KIDLVISDLRMDEMDG 65

Query: 69  ADLIGDIHAQRPALPILVLTAHNSVAVAVQAMRAGATDYLSKPIAPERLLAALNATLEGN 128
             L  +I  Q+P +P+++LTAH S+  AV A + G   +L+KP+  + L  A+++ LE  
Sbjct: 66  LQLFAEIQKQQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYKAIDSALE-- 123

Query: 129 VRGELRPLTEKISAPLAFEDVVGAAPQFRTALAIAAKAARARVPVLIEGESGVGKDVVAR 188
                 P  ++       E +V  +P     L  A   A++ V VLI G+SG GK+++A+
Sbjct: 124 ---HAAPAGDEAWR----ESIVTRSPIMLRLLEQARMVAQSDVSVLINGQSGTGKEILAQ 176

Query: 189 AIHAASPRHKQAMVTVNCGAIPANLVESELFGHERGAFTGAFDRHVGKFLSADMGTIFLD 248
           AIH ASPR K A + +NCGA+P  L+ESELFGH RGAFTGA     G F +A+ GT+FLD
Sbjct: 177 AIHNASPRSKNAFIAINCGALPEQLLESELFGHARGAFTGAVSSREGLFQAAEGGTLFLD 236

Query: 249 EVSEMPLDAQVKLLRVLQDGEVQPIGARRPVHVDVRVIAATNKKLSDEIEAGRFREDLYY 308
           E+ +MP   QVKLLRVLQ+ +V+P+G+ R + ++VR+I+AT++ L   +    FREDLYY
Sbjct: 237 EIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKVMARNEFREDLYY 296

Query: 309 RLNVVQLTVPPLRERMGDIPALCRHLLARIATQPGLRGLGLTDDALALLMQHDWPGNVRQ 368
           RLNVV L +P L ER  DIP L  HLL + A +        + DA+  LM   WPGNVRQ
Sbjct: 297 RLNVVNLKIPALAERAEDIPLLANHLLRQAADRHKPFVRAFSTDAMKRLMAAGWPGNVRQ 356

Query: 369 LQNALFRAAVLCEGDALTPHDFPQVAAHILSRGASGPRQRAAATPPREAAGITLFEGDGH 428
           L N + +   L           P ++  ++ +   G  +  A     EA           
Sbjct: 357 LVNVIEQCVALTSS--------PVISDALVEQALEG--ENTALPTFAEARN--------- 397

Query: 429 VRQLAEIEADVIRLAIGHYRGRMTEVARRLGIGRSTLYRKLA 470
                + E + +R  +   +G +T  AR  G  R+  Y+ L+
Sbjct: 398 -----QFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLS 434