Pairwise Alignments

Query, 217 a.a., Flp pilus assembly protein CpaD from Sphingobium sp. HT1-2

Subject, 193 a.a., components of type IV pilus from Agrobacterium fabrum C58

 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 17/192 (8%)

Query: 26  STDSVNRGVDSVHQPVVSYASYTFD--VQAGDARLAPAEAARLDDW---FATIKLGYGD- 79
           +T+++     + H   +S A ++ D  V AGD+RL  A A  +  +   +A++  G  + 
Sbjct: 2   TTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVNI 61

Query: 80  QVAIVTDAGYYSPDLGEDIANVVARHGMLLGQDSSAAAGSAPEGT---IRLVVRRTTASV 136
           Q+   +     +  + + I + ++  G+  G+       ++P G    IRL     TA  
Sbjct: 62  QMPSGSPNSATAARMAKQIRSTLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAMT 121

Query: 137 PGCPDW-SNKAETPMSLGASSNFGCGVNSNLAAMVADPEDLV--RGQS-TDSELRTATSN 192
             C  W  + ++   +     NFGC   SNLAA +A+P DLV  RG S  D+E R     
Sbjct: 122 GQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPMDLVGPRGMSPIDAERRAV--- 178

Query: 193 RAISTYRDKAPT 204
             I TYR    T
Sbjct: 179 -VIDTYRSGTAT 189