Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Sphingobium sp. HT1-2

Subject, 313 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Escherichia coli ECRC100

 Score =  234 bits (597), Expect = 2e-66
 Identities = 147/310 (47%), Positives = 199/310 (64%), Gaps = 14/310 (4%)

Query: 6   HIPVLLTEVLDALAITPGERHVDGTFGAGGYSSAMAAA---GAQVFAFDRDPDAIREGQA 62
           H  VLL E ++ L I P   ++DGTFG GG+S  + +      ++ A DRDP AI   + 
Sbjct: 7   HTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT 66

Query: 63  LADEKGITLIPGEFSRMEELLAERG-VSSVSGITLDIGVSSMQLDRPERGFSFQADGPLD 121
           + D +  ++I G FS + E +AER  +  + GI LD+GVSS QLD  ERGFSF  DGPLD
Sbjct: 67  IDDPR-FSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLD 125

Query: 122 MTMSQG-GMSAADFLNTAAEEDIADVIYRYGEEPRSRRVARAIVDA---RPLERTGQLAA 177
           M M    G SAA++L TA E DIA V+  YGEE  ++R+ARAIV+    +P+ RT +LA 
Sbjct: 126 MRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAE 185

Query: 178 VVRRALGYKPHDK-KDPSTRTFQAIRIHVNRELEELERALEAAEALLEPGGRLAIVTFHS 236
           VV  A   K  DK K P+TRTFQA+RI VN ELEE+E+AL+++  +L PGGRL+I++FHS
Sbjct: 186 VVAAATPVK--DKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHS 243

Query: 237 LEDRIVKQFLRKRS-GSEAGGSRHLPEKKAEVAPAFEKPAKA-VKPGETELARNPRARSA 294
           LEDRIVK+F+R+ S G +      + E++ +     +  A   + PGE E+A NPRARS+
Sbjct: 244 LEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRARSS 303

Query: 295 TLRSAVRAGA 304
            LR A R  A
Sbjct: 304 VLRIAERTNA 313