Pairwise Alignments

Query, 480 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6- diaminopimelate ligase (EC 6.3.2.13) from Sphingobium sp. HT1-2

Subject, 496 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas putida KT2440

 Score =  260 bits (664), Expect = 9e-74
 Identities = 179/477 (37%), Positives = 248/477 (51%), Gaps = 26/477 (5%)

Query: 21  DTSVTGFAIDNRKVAPGTIFGAFQGLRVNGEDFIADAVKAGAVAIVARPE-AKVEGAVHI 79
           D  +    +D+R V PG +F A  G +V+G + IADA+  GA A+    + A V     +
Sbjct: 16  DPLIRELTLDSRSVRPGDLFLAVPGAKVDGREHIADALARGAAAVAYEEQGANVLPLTDV 75

Query: 80  ADANPRRLLAQL---AARYFA-PFPDVT-VAVTGTNGKTSTVELARQLWRMLGHKSASIG 134
                + L+AQL   A R++  P   +  V VTGTNGKTS  +L  Q   +LG +   IG
Sbjct: 76  PLIPVKGLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLVAQALDLLGQRCGLIG 135

Query: 135 TLGVTTSVDQVSTGLTTPDIVTFLANMSGLKREGITHAAFEASSHGLDQYRTEGLPVAAG 194
           TLG     +  S  LTTPD +   + ++ LK+ G    A E SSH L+Q R   L     
Sbjct: 136 TLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGARAVAMEVSSHALEQGRVAALEFDIA 195

Query: 195 AFTNLSRDHLDYHGDMDSYFDAKMRLFDEVVGDGGAAVIWADDEWSDKAIQRATKR---- 250
             TNLSRDHLDYHG M++Y  AK +LF          V+  DD++  +      +R    
Sbjct: 196 VMTNLSRDHLDYHGSMEAYEAAKAKLF--AWPSLRCQVVNLDDDFGRRLAADFARRPSVD 253

Query: 251 --GLRVLSVGVQGQALRLANR----TPTQLGQTLEIEADGKIYKVNLPLIGAYQAANALT 304
               R+LS  ++     L  R    +   +  TL      +I +    L+G +  +N L 
Sbjct: 254 HIETRLLSYSLESPEASLFCREAVFSDDGVRATLVTAQGERILRSQ--LLGRFNLSNMLA 311

Query: 305 AAGLVIATGGDTAKVLELLGRVQPVRGRLERAVISKAGAP-VYVDYAHTPDGLRAAIEAL 363
           A   ++A      ++L++  ++Q   GR++R  +     P V VDYAHTPD L   +EAL
Sbjct: 312 AVATLLALDYALDEILKVTPQLQGPVGRMQR--LGGGDKPLVVVDYAHTPDALEKVLEAL 369

Query: 364 RPHTRGKLIALFGAGGDRDAGKRPLMGKVAADLADHVIVTDDNPRSEEPSAIRAAVMAG- 422
           RPH  GKL+ LFG GGDRD GKRPLM +VA  LAD V+VTDDNPR+E+PS I   +  G 
Sbjct: 370 RPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPSRIFDDIRPGF 429

Query: 423 --APGAEEIGGRRAAIAAAIGQAGGDDIVLLAGKGHEQGQIIGDRVLPFDDVTVARE 477
                 E + GR  AIA  I  A  +D+++LAGKGHE  Q I      F D+T A +
Sbjct: 430 TRPDDVEFVAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDFSDLTEAEK 486