Pairwise Alignments

Query, 480 a.a., UDP-N-acetylmuramoyl-dipeptide--2,6- diaminopimelate ligase (EC 6.3.2.13) from Sphingobium sp. HT1-2

Subject, 489 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase from Agrobacterium fabrum C58

 Score =  412 bits (1059), Expect = e-119
 Identities = 224/467 (47%), Positives = 295/467 (63%), Gaps = 12/467 (2%)

Query: 6   LIEELG-VEVGGNTGLDTSVTGFAIDNRKVAPGTIFGAFQGLRVNGEDFIADAVKAGAVA 64
           L+ E+G +E+GG T           D+RK APG++F A  G + +G  ++ DAV  GAVA
Sbjct: 18  LLSEIGAIEIGGITA----------DSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVA 67

Query: 65  IVARPEAKVEGAVHIADANPRRLLAQLAARYFAPFPDVTVAVTGTNGKTSTVELARQLWR 124
           +V+    + +  V +   +PR  L+  A+R++   PD  VAVTGT GKTS     RQ+W 
Sbjct: 68  VVSGHAVEADVPVLVV-TDPRLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVRQIWA 126

Query: 125 MLGHKSASIGTLGVTTSVDQVSTGLTTPDIVTFLANMSGLKREGITHAAFEASSHGLDQY 184
             GH +A IGT GV     +    LTTPD VT  A ++ L  EG+THAA EASSHGLDQ 
Sbjct: 127 FAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQR 186

Query: 185 RTEGLPVAAGAFTNLSRDHLDYHGDMDSYFDAKMRLFDEVVGDGGAAVIWADDEWSDKAI 244
           R +G+ ++A  FTNL RDH+DYH  ++ Y  AKMRLFD ++  G  AVI+ADD WSDKAI
Sbjct: 187 RLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAI 246

Query: 245 QRATKRGLRVLSVGVQGQALRLANRTPTQLGQTLEIEADGKIYKVNLPLIGAYQAANALT 304
             A + GL V +VG  GQ L L      +  Q +E+  DG I++V++PL G +Q ANAL 
Sbjct: 247 GAAREAGLEVRTVGRNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALV 306

Query: 305 AAGLVIATGGDTAKVLELLGRVQPVRGRLERAVISKAGAPVYVDYAHTPDGLRAAIEALR 364
           AAGL ++TG   A  L+ L ++    GRLE    +K GA  YVDYAH PD L   + ++R
Sbjct: 307 AAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVR 366

Query: 365 PHTRGKLIALFGAGGDRDAGKRPLMGKVAADLADHVIVTDDNPRSEEPSAIRAAVMAGAP 424
           P T G++I +FG GGDRD GKRP+MG+VA  L+D VIVTDDNPRSE+ + IR+ VMA A 
Sbjct: 367 PFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAA 426

Query: 425 GAEEIGGRRAAIAAAIGQAGGDDIVLLAGKGHEQGQIIGDRVLPFDD 471
           GA EIG R  AI  A+      D +++AGKGHE+GQI+G   LPF D
Sbjct: 427 GALEIGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSD 473