Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Sphingobium sp. HT1-2

Subject, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 1e-29
 Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 59/350 (16%)

Query: 8   VAVLMGGWSAERPVSLSSGEGVAKALESRGHRVTRIDMDR-----------------DVA 50
           +A++ GG S+E  V+L S   +  AL + GHRV  + +DR                 D +
Sbjct: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65

Query: 51  ARL-------------------TETKADVVFNALHGVPGEDGTVQGMMDLMGLTYTHSGL 91
           A L                    E   D++F ALHG  GEDGT+QG+  + GL    SG+
Sbjct: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125

Query: 92  ATSVIAIDKQLTKQALVPHGIPMPGGQIVASESLYAGDPL-----PRPYVLKPVNEGSSV 146
             S +A+DK +TK+ +   G+ +     +A  S+   + L          +KP   GSS+
Sbjct: 126 LGSAMAMDKDVTKRMVQSAGLVVV--PWLAMNSMRPWEELVECLGSSTLFVKPATSGSSI 183

Query: 147 GVAIVTAEGNYGNPIARDSVGPWQEFPELLAEPYIRGRELTTAVL----GDEALLVTELR 202
           GV+ V+    Y    A  +    +E  ++L E  + GRE+   VL    G  A +V E+ 
Sbjct: 184 GVSRVSNALEYAAAFAIAA----REDTKVLVEAAVCGREIECGVLELEEGLMASVVGEII 239

Query: 203 PKSG--FYDFDAKY-TDGMTEHVCPAEIPDEITQACKAIALQAHQLLGCKGASRSDFRWD 259
            K G  +YD+ AKY ++ +T    P+ +P +I    +A+++QA + L  KG +R DF   
Sbjct: 240 KKEGHAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDFFLT 299

Query: 260 DSQGVEG-LYLLEVNTQPGMTPLSLVPEQAKKLGIEYAELVERICEEALT 308
           +    EG + L E+NT PG T  S+ P+  +  G    +LV  + E  L+
Sbjct: 300 E----EGEIILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVEYGLS 345