Pairwise Alignments

Query, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

Subject, 423 a.a., ATPase from Pseudomonas simiae WCS417

 Score =  164 bits (416), Expect = 3e-45
 Identities = 107/300 (35%), Positives = 167/300 (55%), Gaps = 25/300 (8%)

Query: 1   MKEPTVVEIMVNPDGALRLDRLGSGRIDTEVRLAPDQ-VERIIRLVASHVRAEVHAGQPI 59
           +++P+V EI+VN    + ++R G     +++R   D  VER+++ + + +   +    P+
Sbjct: 95  LRDPSVTEILVNGPHRVFIERDGLLH-QSDLRFIDDHHVERVMQRILAPLGRRLDESSPM 153

Query: 60  ISAELPPHADGRAGERFEGVLPPVS-SAPCFSIRKPAQRLHTLADYVADGLMGETVACAL 118
           + A LP       G R   ++PP++   PC SIRK  + +    D VA   + +++    
Sbjct: 154 VDARLPD------GSRVNAIIPPIALDGPCLSIRKFRKDMLKSTDLVAMQTIDQSIFEFF 207

Query: 119 RAAVTERLNILVAGGTSSGKTTLANALLAEMAPENSAVDSRVILIEDTRELQCPLPDTVA 178
           + AV +R NIL++GGT +GKTTL N L   + P       R++ IED  ELQ   P  V 
Sbjct: 208 QEAVGKRCNILISGGTGTGKTTLLNILSQLINPHE-----RLVTIEDVAELQLGHPHVVR 262

Query: 179 LRTRPPH------VAMTDLVRSTMRLRPDRIIVGEVRGPEALDMLKAWNTGHPGGVATIH 232
           L TRPP+      V  +DL+R+ +R+RPDRII+GE+RG E LD++ A NTGH G ++T+H
Sbjct: 263 LETRPPNAEGHGEVRSSDLIRNALRMRPDRIILGEIRGVEVLDVMTAMNTGHDGSMSTVH 322

Query: 233 ANSAAAALTRLEQLC----QEAVITVPRPLIAEAIDVVVFIAGRGVDRR-VATVARVTGL 287
           AN+A  AL RLE L     +       R +I  A+DV++ +      RR V+ V  V G+
Sbjct: 323 ANNAQDALLRLETLVGLTGRVIAEKTLRQMICAALDVIIQLTRMPDGRRCVSEVVEVVGV 382