Pairwise Alignments

Query, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

Subject, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 8e-14
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 108 GLMGETVACALRAAVTERLNILVAGGTSSGKTTLANALLAEMAPENSAVDSRVILIEDTR 167
           G   ET+    R A      ILV G T SGKTT   A+++E+   N  VD ++I IED  
Sbjct: 333 GFADETLRALRRLAAEPYGMILVTGPTGSGKTTTLYAMISEI---NHGVD-KIITIEDPV 388

Query: 168 ELQCPLPDTVALRTRPPHVAMTDLVRSTMRLRPDRIIVGEVRGPEALDM-LKAWNTGHPG 226
           E Q P    + +  +   +     +RS +R  PD+I+VGE+R P+   + +++  TGH  
Sbjct: 389 EYQLPGVLQIPVNEK-KGLTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSALTGHL- 446

Query: 227 GVATIHANSAAAALTRLEQL 246
              TIHAN+    + R  Q+
Sbjct: 447 VFTTIHANNVFDVIGRFSQM 466