Pairwise Alignments

Query, 199 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 68.6 bits (166), Expect = 7e-17
 Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 8/160 (5%)

Query: 6   DSIRARLDWFKQAILPHEGALRSRLRRVVSHRQDVDDIVAECMTRAYANGDIHRAQSGKA 65
           DS  AR   F Q        + + + R V  R    D+V E   R +   ++ + ++   
Sbjct: 13  DSAGARAR-FVQVFQAQRARMEALVSRRVGCRATASDLVQELFLRFWRRPEV-KVEALDT 70

Query: 66  FLFQIARNLLIDEARREKIVSLELVAELDVLQTDNST----EEALHARDELRHLQAILDT 121
           +L + A NL ID  R E   S E VAE  V  ++ S     E+A+    +L+ ++A L  
Sbjct: 71  YLLRCAGNLAIDHLRSES--SRERVAEAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRA 128

Query: 122 LPAQCRRAFILRRVHEKSVKEIAEEMQLSVFTVDKHLTRA 161
           LP + R+ F+L R+H     EIA+ MQLS   V+KH+ RA
Sbjct: 129 LPERTRQIFLLNRIHGCKYSEIAKAMQLSQSAVEKHMMRA 168