Pairwise Alignments

Query, 199 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

 Score = 53.5 bits (127), Expect = 2e-12
 Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 22  HEGALRSRLRRVVSHRQDVDDIVAECMTRAYAN-GDIHRAQSGKAFLFQIARNLLIDEAR 80
           H G L+  L R + +  D  D+  +   R  +  G+ +     +A L  IA+ L++D  R
Sbjct: 19  HHGWLQGWLGRKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVDRWR 78

Query: 81  REKI--VSLELVAELDVLQTDNSTEEALHARDELRHLQAILDTLPAQCRRAFILRRVHEK 138
           R+ +    LE +A L   +   S E      + L  + A+L  +PA+ R+ F+L ++   
Sbjct: 79  RQDVERAYLEAIAHLPQPEVP-SPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGL 137

Query: 139 SVKEIAEEMQLSVFTVDKHLTRA 161
           +  +IAE++Q+S+ T+ + +  A
Sbjct: 138 TYAQIAEQLQVSLITIKRDMRTA 160