Pairwise Alignments

Query, 199 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.8 bits (133), Expect = 5e-13
 Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 31  RRVVSHRQDVDDIVAECMTRAYANGD-IHRAQSGKAFLFQIARNLLIDEARREKIVSLEL 89
           R++    +D + IV E   + + N   +    S  A+L  I R+++I + +R+  ++   
Sbjct: 40  RKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLSFNAYLIAIVRSIVIRQLQRKANLTAYK 99

Query: 90  VAELDVLQT-DNSTEEALHARDELRHLQAILDTLPAQCRRAFILRRVHEKSVKEIAEEMQ 148
              L  ++  DN TE+ +   + +     ++DTLP   +R F++R + + S+ EIAE++Q
Sbjct: 100 KYSLQRMEDWDNQTEDQVIFSEMMNVSSKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQ 159

Query: 149 LSVFTVDKHLTRA 161
           +S  TV   + RA
Sbjct: 160 VSKKTVKNQVFRA 172