Pairwise Alignments

Query, 199 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 203 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.1 bits (131), Expect = 9e-13
 Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 22  HEGALRSRLRRVVSHRQDVDDIVAECMTRAYANGDIHRAQSGKAF---LFQIARNLLIDE 78
           ++ A+   + +++    D +D+  E   +A+ N  +H+ +    F   LF+IA N  ID 
Sbjct: 38  YKKAVYFMILKMIRDADDAEDLTMEAFAKAFRN--LHKFKKDYTFSTWLFRIATNNTIDF 95

Query: 79  ARREKIVSLEL----------VAELDVLQTDNSTEEALHARDELRHLQAILDTLPAQCRR 128
            R++K+ ++ L             +DV   DN+ ++       +  ++  +D LPA+ R+
Sbjct: 96  IRKKKLKTMSLNNTLTDDGGNSVNIDVEDDDNNPQDEFIKSQRIEMVRIFVDKLPAKYRK 155

Query: 129 AFILRRVHEKSVKEIAEEMQLSVFTVDKHLTRA 161
              LR   E S  EIA+E+   + TV   L R+
Sbjct: 156 LVKLRYFDELSYDEIAQELDKPLGTVKAQLHRS 188