Pairwise Alignments

Query, 372 a.a., Gene Transfer Agent capsid protein; Phage major capsid protein from Sphingobium sp. HT1-2

Subject, 430 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  240 bits (613), Expect = 5e-68
 Identities = 138/378 (36%), Positives = 202/378 (53%), Gaps = 25/378 (6%)

Query: 3   EQVTDGLEGAFEAVAQGERIAALEAQLGAMRVQMGRPALDGVKGGEVDPARGAFVERYLR 62
           E++   +E A +A      + A+ AQ  A   + G     G      DP        + R
Sbjct: 69  EKIDQAIEAAQKA------LDAISAQQAAATAKAG-----GGAAAPADPEYSTAWGAFFR 117

Query: 63  QGLEAGVELKSFSGASGAA---------GGYAVPREIDQLIGSTLKAISPIRGIANVVRT 113
           +G E   ++K+ + A   A         GGY  P E D+ I + LK ISPIR  A V   
Sbjct: 118 EG-EGEAQIKALNKAGPRAAMTVGSNPDGGYLAPVEWDRTITARLKEISPIRQNAQVQSI 176

Query: 114 GTAGYRKLVTAGGIVSGWASETGARADTGTPSFNEIAPPSGELYANPAASQAMLDDAQFD 173
              G+ ++     + SGW +E  AR  T TP    +    GELYA P ASQ +L+DA+ D
Sbjct: 177 SKPGFTRVYNDRSVGSGWVAENAARPATSTPQVAPLTFTPGELYAFPFASQTLLEDAEVD 236

Query: 174 VEGWLAGEIAREFAVAEGAAFVNGNGTNKPKGFLTYTTTSEADSVRAFGSLQYVASGAAG 233
           +EGWLA E+  EF+  E  AF++G+G+ KP G LTY T +   +   +G+++ V SGAA 
Sbjct: 237 IEGWLASEVETEFSRQENIAFLSGDGSGKPYGILTYVTGAANAARHPWGAIEVVNSGAAA 296

Query: 234 AFAGSNPQDRLIDLVQSLRAPYRQGASFVMNSATLAAIRKMKTSDGAFIWQPGLAAGQPA 293
           A       D +I L+ +L   +R GA   MN  T  A+RK+K   G ++WQP    GQP+
Sbjct: 297 ALT----SDGIITLIYTLPDAFRAGAKMYMNRLTRMAVRKLKDGQGNYLWQPSYQVGQPS 352

Query: 294 TLLGYPVVEAEDMPDIAVNSLSIAFGNFQAGYVIAERSDTSILRDPFSNKPFVHFYAVKR 353
           TL G  +V+  DMP++A  ++ + +G+  A Y++ +R   S+LRD  +NKP+V FY  KR
Sbjct: 353 TLAGEAIVDVPDMPNVAAGNIPLLYGDMSATYLVVDRVGISVLRDALTNKPYVGFYTRKR 412

Query: 354 IGGAVANSEAIKLMKFAA 371
           +GG V N E +K MK +A
Sbjct: 413 VGGGVQNPEPMKAMKISA 430