Pairwise Alignments

Query, 578 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  327 bits (838), Expect = 8e-94
 Identities = 220/586 (37%), Positives = 305/586 (52%), Gaps = 27/586 (4%)

Query: 11  YRFLLSEVLGFDHAMAELNKDVDADLAVTVLDEAGRMCAER-LAPLNREGDEHGSQLIDG 69
           Y  L +E L      AE +++   D A+T      R  AE+  AP NR+ DE+  + +DG
Sbjct: 16  YEVLDAEALTLRPRFAEHSRET-FDAALTT----ARTIAEKYFAPHNRKADENEPRYVDG 70

Query: 70  AVRTPPGFAQAYRDFADAGWAALSADPDHGGQGLPFILQLWLDEMLSAANLSFGLFPGLT 129
                P    A   F +AG+   + D + GG  LP ++         AAN     +P LT
Sbjct: 71  RAELIPEVKPAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAYPFLT 130

Query: 130 RGACEAIAAHASEELKATYLSRMVSGEWTGAMALTESSAGTDLALLKTKAEPQGDGSYAV 189
            GA   I +  S+E K  +L  M+ G + G MALTE  AG+ LA ++T+AEP GDGSY +
Sbjct: 131 MGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDGSYRL 190

Query: 190 TGTKIFISSGDHDFGGNIVHLVLARLPDAPAGVKGISLFLVPKFLPGADGAFDQRNGMSV 249
            G KIFIS GDH+   NIVH+VLA+LPDAP GVKGISLF+VPK+    +G+   RN + +
Sbjct: 191 KGNKIFISGGDHELSENIVHMVLAKLPDAPPGVKGISLFIVPKYHVNPNGSRGPRNDVLL 250

Query: 250 GALEKKMGIHAQPTCVMNYDG---ATGWLVGEAHRGLAAMFTMMNAERLMVGIQGLGIAG 306
             L  KMG     +  +N+       G+LVG+ H+GLA MF MMN  R+ VG+  + +  
Sbjct: 251 AGLFHKMGWRGTTSTALNFGDNGQCVGYLVGQPHQGLACMFQMMNEARIGVGMGAVMLGY 310

Query: 307 AAYQQAAGYAKERLQGRSADNA---RAPVAIIEHADVRRMLLNIRSFVEAGRALAGWTAL 363
           A Y  +  YA++R QGR  DN       V IIEH DV+RMLL  +++VE    L  + A 
Sbjct: 311 AGYLYSLEYARQRPQGRLPDNKDPHSPAVPIIEHTDVKRMLLAQKAYVEGAFDLGLYAAR 370

Query: 364 QHDRSQHHADAGERAKADALVALLTPVVKASFTDFGFESAVQAQQVFGGHGYIREWGMEQ 423
             D +    D   R  A  L+ LLTP+VK+  + F  ++   A Q+ GGHGY RE+ +EQ
Sbjct: 371 LFDDTHTAPDENARKPAQDLLDLLTPIVKSWPSAFCLKANELAIQILGGHGYTREYPVEQ 430

Query: 424 YVRDARIAQIYEGTNGVQAADLVGRKLPMAGGAVVEGYFALIAADVEAAGG----SVIAR 479
           Y RD R+  I+EGT G+Q+ DL+GRKL    GA ++    LIAA  E A        + +
Sbjct: 431 YYRDNRLNPIHEGTEGIQSLDLLGRKLAQHNGAGLKQLIRLIAATCERASHHPNLDPLRQ 490

Query: 480 STCTALDALRTATAALQG--ADTDAAGAAAVDYLRLSAL--VSMGWMWTRMAQAAAQG-- 533
                 + L+  T AL G  A    AGA A   L L A     +GW W   A  A  G  
Sbjct: 491 PLEQLANRLQGVTLALLGDLAQGKVAGALANSALYLKAFGHCVIGWRWLEQAVHAELGML 550

Query: 534 -----DSPLHQAKLKLADYFALRVLPQAQGLAATIAAGEASIMALE 574
                D   +  KL+ A YF    +P      A + A + + + ++
Sbjct: 551 KGTAADRDFYLGKLQAARYFLTWEVPGCHNELALLEAHDDTCLGMQ 596