Pairwise Alignments

Query, 578 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  548 bits (1412), Expect = e-160
 Identities = 297/589 (50%), Positives = 380/589 (64%), Gaps = 11/589 (1%)

Query: 1   MYSYVPPIDDYRFLLSEVL---GFDHAMAELNKDVDADLAVTVLDEAGRMCAERLAPLNR 57
           M +Y  P+ D RF+L +V    G    +  L + +DAD A  +L+EA ++  + +APL+R
Sbjct: 1   MTTYSAPLRDMRFVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSR 60

Query: 58  EGDEHGSQLIDGAVRTPPGFAQAYRDFADAGWAALSADPDHGGQGLPFILQLWLDEMLSA 117
            GDE G     G V TP GF +A+  + + GW  L  +P++GG G+P +L +  +EML A
Sbjct: 61  NGDEQGVCFDAGQVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYA 120

Query: 118 ANLSFGLFPGLTRGACEAIAAHASEELKATYLSRMVSGEWTGAMALTESSAGTDLALLKT 177
           A+ SF L+  L+ G+C AI AHASE LKATYL  +  G W G M LTE  AGTDL L++T
Sbjct: 121 ADCSFSLYSALSAGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRT 180

Query: 178 KAEPQGDGSYAVTGTKIFISSGDHDFGGNIVHLVLARLPDAPAGVKGISLFLVPKFLPGA 237
           +AEPQ DGS  ++G+KIFI+ G+ D   NIVHLVLA++PDAPAG KGISLFLVPKFL  A
Sbjct: 181 RAEPQADGSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEA 240

Query: 238 DGAFDQRNGMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEAHRGLAAMFTMMNAERLMV 297
           DG    RN +  G++E KMGI A  TCVMN+DGA G+LVGE ++GL AMFTMMN ERL +
Sbjct: 241 DGRLGARNAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLTAMFTMMNYERLSI 300

Query: 298 GIQGLGIAGAAYQQAAGYAKERLQGRSAD----NARAPVAIIEHADVRRMLLNIRSFVEA 353
           GIQG+G A A+YQ AA YA ERLQ R+A     + +A   II H DVRRMLL +R+  EA
Sbjct: 301 GIQGIGCAEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMRTLTEA 360

Query: 354 GRALAGWTALQHDRSQHHADAGERAKADALVALLTPVVKASFTDFGFESAVQAQQVFGGH 413
           GRA A +   Q D +++  DAGER  A  LVALLTPV KA FTD G ES V  QQV+GGH
Sbjct: 361 GRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGH 420

Query: 414 GYIREWGMEQYVRDARIAQIYEGTNGVQAADLVGRKLPMAGGAVVEGYFALIAA-DVEAA 472
           GYIREWG EQ VRD RIAQIYEGTNG+QA DL+GRK+   GG  +  + + + A  V+A 
Sbjct: 421 GYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEVRAFSVDAP 480

Query: 473 GGSVIARSTCTALDALRTATAALQGADTDAAGAAAVDYLRLSALVSMGWMWTRMAQAA-- 530
                 +++   L+A  +   A  G D +   A AV+YL+L  L +  +MW RMA  A  
Sbjct: 481 LHREALQASLARLEATSSWLRAQAGEDANLVSAVAVEYLQLFGLTAYAYMWARMAAVALA 540

Query: 531 -AQGDSPLHQAKLKLADYFALRVLPQAQGLAATIAAGEASIMALEIDAF 578
               D   H AKL  A ++  RVLP+  GL A+I AG  S+  LE   F
Sbjct: 541 KRDEDDAFHGAKLACAAFYFQRVLPRGLGLEASIRAGSGSLYGLEATQF 589