Pairwise Alignments

Query, 578 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  501 bits (1290), Expect = e-146
 Identities = 286/596 (47%), Positives = 356/596 (59%), Gaps = 28/596 (4%)

Query: 3   SYVPPIDDYRFLLSEVLGFDHAMAELNKDVDADLAVTVLDEAGRMCAERLAPLNREGDEH 62
           +Y  P+ D RF+L E+        +L  ++D D    +L+EA R   + +APLNR  DE 
Sbjct: 2   NYQAPLRDMRFVLHELFDLSGHCQQLGIELDRDTLDGILEEAARFTGQIIAPLNRNSDEQ 61

Query: 63  GSQLIDGAVRTPPGFAQAYRDFADAGWAALSADPDHGGQGLPFILQLWLDEMLSAANLSF 122
           G Q + G V TP G   AYR + + GWA+++    +GGQGLP +      EML AA+LSF
Sbjct: 62  GCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASLSF 121

Query: 123 GLFPGLTRGACEAIAAHASEELKATYLSRMVSGEWTGAMALTESSAGTDLALLKTKAEPQ 182
            ++ GLT GA  A+  H SE LK  YLSRMVSGEW G M LTE  AGTDLALL+T+A+P+
Sbjct: 122 RIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQPE 181

Query: 183 GDGSYAVTGTKIFISSGDHDFGGNIVHLVLARLPDAPAGVKGISLFLVPKFLPGADGAFD 242
            DGSY +TG+KIFIS G+ D   NIVHLVLARLPDAPAGV+GISLFLVPK LPG      
Sbjct: 182 ADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGG----- 236

Query: 243 QRNGMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEAHRGLAAMFTMMNAERLMVGIQGL 302
           +RN +  GALE KMGI    TCVMN+DGA GWLVGEA++GLA MFTMMN  R  VG+QGL
Sbjct: 237 ERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQGL 296

Query: 303 GIAGAAYQQAAGYAKERLQGRSADNARAPVA-------IIEHADVRRMLLNIRSFVEAGR 355
           GIA AA+Q    YA+ERLQ RS      PVA       II H DVRRMLL  ++  E  R
Sbjct: 297 GIAEAAFQGGLAYARERLQSRS---LAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCR 353

Query: 356 ALAGWTALQHDRSQHHADAGERAKADALVALLTPVVKASFTDFGFESAVQAQQVFGGHGY 415
            L  +TA Q D       A  R  A    ALL P+VKA FTD G E A    QV+GGHGY
Sbjct: 354 MLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGY 413

Query: 416 IREWGMEQYVRDARIAQIYEGTNGVQAADLVGRKLPMAGGAVVEGYFALIAADVEAAGGS 475
           IREWGMEQ +RD+RI Q+YEGTNG+QA DL+ RK+   GGA +      +A  V AA   
Sbjct: 414 IREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANAL 473

Query: 476 VIARSTCTALDALRTATAALQG-------ADTDAAGAAAVDYLRLSALVSMGWMWTRMA- 527
              ++  T +        AL G        D   +GA +VD+L  SA V +  MW + A 
Sbjct: 474 GGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAV 533

Query: 528 -----QAAAQGDSPLHQAKLKLADYFALRVLPQAQGLAATIAAGEASIMALEIDAF 578
                 A    ++  ++AKL  A ++  R+LP+A      +  G   +MAL    F
Sbjct: 534 RAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPASDF 589