Pairwise Alignments

Query, 578 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  553 bits (1426), Expect = e-162
 Identities = 299/594 (50%), Positives = 391/594 (65%), Gaps = 18/594 (3%)

Query: 1   MYSYVPPIDDYRFLLSEVLGFDHAMAELN---KDVDADLAVTVLDEAGRMCAERLAPLNR 57
           M  Y  P+ D RF+L+EV        +L    + VDAD A+ VL+EAG++ A  +APL+R
Sbjct: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60

Query: 58  EGDEHGSQLIDGAVRTPPGFAQAYRDFADAGWAALSADPDHGGQGLPFILQLWLDEMLSA 117
             DE G    +GAVRTP GF +AY  +A+ GW  +  DP  GG G+P  +   ++EM++A
Sbjct: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120

Query: 118 ANLSFGLFPGLTRGACEAIAAHASEELKATYLSRMVSGEWTGAMALTESSAGTDLALLKT 177
           ++L+FGL+P LT GAC +I AHASE LK  YL  M +G W G+M LTE  AGTDL +++T
Sbjct: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 178 KAEPQGDGSYAVTGTKIFISSGDHDFGGNIVHLVLARLPDAPAGVKGISLFLVPKFLPGA 237
           KAEPQ DGSY V+GTKIFI+ G+HD   NI+HLVLA+LPDAPAG KGISLFLVPKFL   
Sbjct: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240

Query: 238 DGAFDQRNGMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEAHRGLAAMFTMMNAERLMV 297
           DG+   RN  + G++E KMGI A  TCVMN+D A G++VGE ++GLAAMFTMMN ERL V
Sbjct: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300

Query: 298 GIQGLGIAGAAYQQAAGYAKERLQGR------SADNARAPVAIIEHADVRRMLLNIRSFV 351
           GIQGL  A  +YQ A  YA++RLQ R      + D A  P  II H DVRRMLL +++ +
Sbjct: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADP--IIVHPDVRRMLLTMKALI 358

Query: 352 EAGRALAGWTALQHDRSQHHADAGERAKADALVALLTPVVKASFTDFGFESAVQAQQVFG 411
           E GRA + + A+Q D +++  DA  R +++ LVALLTPV KA  TD G E AV  QQVFG
Sbjct: 359 EGGRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFG 418

Query: 412 GHGYIREWGMEQYVRDARIAQIYEGTNGVQAADLVGRKLPMAGGAVVEGYFALIAADVEA 471
           GHGYIREWG EQ VRD RI QIYEGTNG+QA DL+GRK+  +GGA  + +   I   +  
Sbjct: 419 GHGYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITG 478

Query: 472 AGGSV--IARSTCTALDALRTATA-ALQGA--DTDAAGAAAVDYLRLSALVSMGWMWTRM 526
           AG  +   A+    +LD L   T   LQ A  + +  GAA+V+YL     V+ G+MW  M
Sbjct: 479 AGSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538

Query: 527 AQA--AAQGDSPLHQAKLKLADYFALRVLPQAQGLAATIAAGEASIMALEIDAF 578
           A+A  A +GD+P +  KL  A ++  R+LP+   L A++ AG  S+  L+ + F
Sbjct: 539 ARAALAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592