Pairwise Alignments

Query, 578 a.a., Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) from Sphingobium sp. HT1-2

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  533 bits (1374), Expect = e-156
 Identities = 277/599 (46%), Positives = 385/599 (64%), Gaps = 23/599 (3%)

Query: 1   MYSYVPPIDDYRFLLSEVLGFDHAMAELN--KDVDADLAVTVLDEAGRMCAERLAPLNRE 58
           M  Y  P+ D RF+  E+LG++     L   +D   D+   +L+E  + C + L+PLNR 
Sbjct: 1   MPDYKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRV 60

Query: 59  GDEHGSQLIDGAVRTPPGFAQAYRDFADAGWAALSADPDHGGQGLPFILQLWLDEMLSAA 118
           GD+ G    +  V+TP GF +AY+ F + GW +L+ D +HGGQGLP  L L L EM+  +
Sbjct: 61  GDQEGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGS 120

Query: 119 NLSFGLFPGLTRGACEAIAAHASEELKATYLSRMVSGEWTGAMALTESSAGTDLALLKTK 178
           N S+G++PGL+ GA   I+AH + E + TYL+++VSGEWTG M LTE   GTDL +L+TK
Sbjct: 121 NWSWGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTK 180

Query: 179 AEPQGDGSYAVTGTKIFISSGDHDFGGNIVHLVLARLPDAPAGVKGISLFLVPKFLPGAD 238
           AEPQ DGSY V+GTKIFIS+G+HD   NIVH+VLARLPDAPAG KGISLF+VPKFLP A+
Sbjct: 181 AEPQADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAE 240

Query: 239 GAFDQRNGMSVGALEKKMGIHAQPTCVMNYDGATGWLVGEAHRGLAAMFTMMNAERLMVG 298
           G   +RNG+S G++E KMGIH   TCVMN+D ATG+L+G A++GL  MFT MN  RL   
Sbjct: 241 GGVGERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTA 300

Query: 299 IQGLGIAGAAYQQAAGYAKERLQGRSADNARAP----VAIIEHADVRRMLLNIRSFVEAG 354
           +QGL  A  A+Q    YA+ERLQ RS    +AP      II H DVRRMLL +++F E  
Sbjct: 301 LQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN 360

Query: 355 RALAGWTALQHDRSQHHADAGERAKADALVALLTPVVKASFTDFGFESAVQAQQVFGGHG 414
           RA+  +TA Q D  ++  D  ER KADAL+A LTP+ KA  T+ GFE+A    Q++GGHG
Sbjct: 361 RAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHG 420

Query: 415 YIREWGMEQYVRDARIAQIYEGTNGVQAADLVGRKLPMAGGAVVEGYFALIAADVEAAGG 474
           +I EWGMEQ VRD+RI+ +YEGT G+QA DL+GRK+ M  G  ++G+  ++    +A  G
Sbjct: 421 FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEG 480

Query: 475 SVIARSTCTALDA---------LRTATAALQGADTDAAGAAAVDYLRLSALVSMGWMWTR 525
           +   +     L A         ++   AA++  D +  GAA+VDYL  S    + + W  
Sbjct: 481 NEAVKEFVEPLAAINKEWGELTMKVGMAAMK--DREEVGAASVDYLMYSGYACLAYFWAD 538

Query: 526 MAQAAAQ------GDSPLHQAKLKLADYFALRVLPQAQGLAATIAAGEASIMALEIDAF 578
           +A+ AA+       +   + AKL+ A ++  R+LP+ +   AT+ +G  ++MA++ + F
Sbjct: 539 IARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEEHF 597