Pairwise Alignments

Query, 541 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 691 a.a., DNA polymerase III, gamma subunit from Pseudomonas putida KT2440

 Score =  312 bits (800), Expect = 2e-89
 Identities = 184/415 (44%), Positives = 254/415 (61%), Gaps = 16/415 (3%)

Query: 8   YRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTARLIAKAL 67
           Y+VLARK+RPR+FRE++GQ  +++ L NA+   RL HA+L TG RGVGKT+ AR+IAK L
Sbjct: 3   YQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCL 62

Query: 68  NCIGPDGQGGPTIDPCGVCEPCMAIAEGRHIDVVEMDAASHTGVDDVREIIEAVRYAAVS 127
           NC     + G T  PCG C  C  I EGR +D++E+DAAS T V+D RE+++ V+YA   
Sbjct: 63  NC-----ETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSR 117

Query: 128 ARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRR 187
            R+K+Y+IDEVHMLS ++FNALLKTLEEPP +VKF+ ATT+  K+P T+LSRC +F L+ 
Sbjct: 118 GRFKVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKN 177

Query: 188 IPAEMLAGHFAHVVEAEKVAAEPDALSLIAQAAEGSARDGLSILDQAIAHAEMGEGEPMV 247
           +  E +  H +HV+ AE V  E DAL L+ +AA+GS RD +S+ DQAIA      GE  V
Sbjct: 178 MSPERVVEHLSHVLAAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAF-----GEGKV 232

Query: 248 TAAQVREMLGLSDRGSTRRLLGLLLEGDTAALLGGVRDQYALGVEPLSLMRGLLELVHAV 307
            AA VR MLG  D G    +L  LLEGD  ALL  VR+    G +   ++  +L ++H V
Sbjct: 233 LAADVRAMLGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRV 292

Query: 308 TLVKAGRDIATPGQSDEERGALADWASQIGFGPLHRLWQLMLKGHDEVATAALPIEACEM 367
            + +A  +    GQ D ER  +   AS +    +   +Q+ L G  ++  A  P    EM
Sbjct: 293 AIAQALPEAVDNGQGDRER--VLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEM 350

Query: 368 ALLRVMHAATMPDPSDLAR--MLQGGVPTAAPAMLGQASAAAAPA-PEPASSLPA 419
            LLR++ A    D  D  +  +   G+  A     GQ +AAA  A   P +++PA
Sbjct: 351 VLLRML-AFRPADTDDAPKPVLKPTGISQATADPAGQVAAAAPVALSPPVAAVPA 404