Pairwise Alignments

Query, 398 a.a., Uncharacterized MFS-type transporter from Sphingobium sp. HT1-2

Subject, 394 a.a., involved in either transport or processing of arabinose polymers (VIMSS) from Escherichia coli BW25113

 Score =  215 bits (547), Expect = 2e-60
 Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 2/348 (0%)

Query: 13  VLFALSVGAFAIGTTEFASMSLLPFFARDLHIDLPTAGHAISAYALGVVVGAPLIAAFAA 72
           V+ +L++G F +G  EF  M +L   A ++ I +P AGH IS YALGVVVGAP+IA F++
Sbjct: 4   VILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSS 63

Query: 73  RLPRRTLLIALMAMFAVGNGLSALSPSYHWMLLFRFLSGLPHGAYFGVAALVAASLVPIE 132
           R   + +L+ L+A+  +GN +  LS SY  + + R +SG PHGA+FGV A+V + ++   
Sbjct: 64  RYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG 123

Query: 133 KRTLAIAKVMSGLTIATVLGVPVANWMGQILGWRSGFFVVCALAVLTMSLVALYAPRDAG 192
           K T A+A ++SG+T+A +LG+P+  ++ Q   WR  F ++    +  M+ V  + P    
Sbjct: 124 KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRD 183

Query: 193 DPKASPMRELSALGKSQVWLTLLTGAIGFGGLFAVYTYVASTMIEVTHVSETLVPLILIV 252
           + K +   +   L     WL       G  G+FA ++YV   M+ ++  SET +  I+++
Sbjct: 184 EAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMML 243

Query: 253 FGLGMTIGNLVVAWLADRALNRTVIGILVWSAVALALFPFMAGNIWSLSLIVFLIGIGG- 311
            GLGM +GN++   ++ R     +  +  +  V   L  F  G + + SLI   I   G 
Sbjct: 244 VGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGL 303

Query: 312 -GMGTPLQARLMDVAGDAQTLAAALHHSAFNIANALGPWLGGLSIAAG 358
             +  PLQ  L+  A   + L AA    AFN+ +A+G + GG+ +  G
Sbjct: 304 FALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLG 351