Pairwise Alignments

Query, 570 a.a., SSU ribosomal protein S1p from Sphingobium sp. HT1-2

Subject, 861 a.a., putative transcriptional accessory protein from Pseudomonas putida KT2440

 Score = 68.2 bits (165), Expect = 1e-15
 Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 194 IQTLAEGQIIEGVVKNITDYGAFVDLG-GIDGLLHVTDLSYKRINHPNEMINIGDTVRVQ 252
           ++ L  G I+EGVV N+T++GAFVD+G   DGL+H++ LS K +  P E +  GD V+V+
Sbjct: 730 LKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVK 789

Query: 253 IIRINRETQRISLGMK 268
           ++ ++   +R+ L M+
Sbjct: 790 VMEVDIPRKRVGLSMR 805



 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 285 GAKLSGRVTNITEYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVIVLEVD 344
           G  L G VTN+T +GAFV++    +GLVH+S +S  K    P + V     V+V V+EVD
Sbjct: 736 GMILEGVVTNVTNFGAFVDIGVHQDGLVHISALS-EKFVKDPREAVKAGDVVKVKVMEVD 794

Query: 345 PEKRRISLGLKQAQS 359
             ++R+ L ++ + +
Sbjct: 795 IPRKRVGLSMRMSDT 809



 Score = 49.3 bits (116), Expect = 6e-10
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 372 GSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKGETVQAVVLDID 431
           G  +EG V N T FG F+ +    DG+VH+S ++     +   A+ + G+ V+  V+++D
Sbjct: 736 GMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAV-KAGDVVKVKVMEVD 794

Query: 432 VEKERISLGMKQLERGGPAAGGTTAAAAGLNKN 464
           + ++R+ L M+  +  G    G      G   N
Sbjct: 795 IPRKRVGLSMRMSDTPGEKVEGNRGGNRGNGGN 827