Pairwise Alignments

Query, 438 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  223 bits (569), Expect = 7e-63
 Identities = 157/449 (34%), Positives = 229/449 (51%), Gaps = 46/449 (10%)

Query: 9   IALVDDDDDLRAAMAQTLTLAGHEVRAFARAADALAAIDADFPGVVVSDVRMPHMSGIDL 68
           + LV+DD  LR A+  TL + G   +A   A +AL A+  D   +VVSDV MP M G  L
Sbjct: 5   VLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDGHQL 64

Query: 69  FRALHARDAELPVILVTGHGDVPMAVDALKAGAWDFLTKPFNPDALLASVARASEKRLLV 128
              L  +  +LPV+L+T H  V  AV+A++ GA D+L KPF P ALL  V R +  R+  
Sbjct: 65  LSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAGRV-- 122

Query: 129 IENRRLRAMVDTAVASPLIGHSPAIERLRDMVATLADTNIDILVEGETGTGKELVARMIH 188
                      T    P +   PA  +L ++ A +A ++  +L+ GE+GTGKE++AR IH
Sbjct: 123 -----------TGEEGP-VACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIH 170

Query: 189 QRSRRASAQFVSIACAAVPDAIAETSLHGES----LAGRAPLEGRLARAHQGTLFLDDVD 244
           Q+S RA+  FV+I CAA+PD + E +L G          A   G+  +A  GTL LD++ 
Sbjct: 171 QQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEIS 230

Query: 245 QSGPALQAHLIQFLEDRLVRPVGAREPQPVDLRVIGC----MTQQGQAATIQPALLYRLA 300
           +   ALQA L++ L++R V  VG R+P  +D+RV+      +  +  A   +  L YRL+
Sbjct: 231 EMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLS 290

Query: 301 AVRLHIPPLRERREDIPLIFAHLLDAAARRFRRTVPPVSRAVLAHLLDHDWPGNVHELGR 360
              L   PLRER  DI  +   LL     + +     +S A  A L  + WPGNV EL  
Sbjct: 291 VFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDN 350

Query: 361 LAERLALGLEQEPVADGA------TLPLDA-----------------RMDAFERMAIIEA 397
             +R AL L+Q  V + A       +PL A                  M   E   II+ 
Sbjct: 351 ALQR-ALILQQGGVIEAADFCLAGAIPLSAGTEPSLEVVADAGGLGDDMRRHEYQMIIDT 409

Query: 398 IQATGGDMGQAIERLGLPRKTFYYRVRRL 426
           ++A  G   +A ERLG+  +T  Y++ ++
Sbjct: 410 LRAERGRRKEAAERLGISPRTLRYKLAQM 438