Pairwise Alignments

Query, 456 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 484 a.a., toxic metabolite efflux MATE transporter YeeO from Escherichia coli ECRC62

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 104/452 (23%), Positives = 176/452 (38%), Gaps = 41/452 (9%)

Query: 12  RALVTLAIPMIAGNVAWSGIAATDLLLVGRLGAEAVAAGALAINLFNALLIFGLGLVTAA 71
           R +  LA+P+   N     +      LV  LG +A+A   LA +    ++ F   +    
Sbjct: 29  REITPLAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGT 88

Query: 72  APLIA---SERGRRRHSVRDVRRTVHQTLRAAAFFVLPAWLILWHCEAILRAMGQEPDLA 128
             ++A    +R RRR  V   +  V  TL    F VL A LI    E I+  +       
Sbjct: 89  TVVVAFSLGKRDRRRARVATRQSLVIMTL----FAVLLATLIHHFGEQIIDFV------- 137

Query: 129 REAGHLMRGMQWALLPFLCFTTLRNFISALERPLWG-----------LIIMLLAIPFNVL 177
             AG     ++   L +L  T L    +A+     G           L+I       N++
Sbjct: 138 --AGDATTEVKALALTYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNII 195

Query: 178 VGWALIFGHLGLPALGLLGAGIASTLSSTFLFLGLLTVILVD-RRFRRYRLMGRFWTRDR 236
           +   LI+G    P LG +GAG+  T+S     + +L V+ +      R  L   F   + 
Sbjct: 196 ISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNF 255

Query: 237 DRQRAVWTLGLPIAITLGLEVTVFNASAFLMGLIDRESLAAHAVAIQIASLVFMVPMGIG 296
                V  +G+P ++   L  +    +   +  +    +A + +A  IA+L+ +    +G
Sbjct: 256 SIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALG 315

Query: 297 QAATV----RVGVAYGRADPAAIGRAGWLALIVGTGFAMAAALMLVLIPRPLVSIFLDVH 352
            A+T+    R+GV         +    WL+ +  T  A   A      P   V       
Sbjct: 316 SASTIITGRRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTA------PFAGVMASFYTQ 369

Query: 353 DPANLATANLAVSFLAVAALFQLVDAAQAVGAGVLRGIQDTKVPMIFALFGYWIIGIGVG 412
           DP      ++ V  + + ALF  + +A  V     +G +D +  M  ++   W   + VG
Sbjct: 370 DPQ---VKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVG 426

Query: 413 ALLAFPMGLHGVGIWFGLAAGLGTVAILLIAR 444
            +L   +G   VG+W G+ A     A+L   R
Sbjct: 427 YVLGIMLGWGVVGVWMGMFADWAVRAVLFYWR 458



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 8/222 (3%)

Query: 240 RAVWTLGLPIAITLGLEVTVFNASAFLMGLIDRESLAAHAVAIQIASLVFMVPMGIGQAA 299
           R +  L +PI +     + +   S FL+  + ++++A   +A     ++      I    
Sbjct: 29  REITPLAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGT 88

Query: 300 TVRVGVAYGRADPAAIGRAGWLALIVGTGFAMAAALMLVLIPRPLVSIFLDVHDPANLAT 359
           TV V  + G+ D      A   +L++ T FA+  A ++      ++     V   A    
Sbjct: 89  TVVVAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDF---VAGDATTEV 145

Query: 360 ANLAVSFLAVAALFQLVDAAQAVGAGVLRGIQDTKVPMI----FALFGYWIIGIGVGALL 415
             LA+++L +  L     A   +G+G LRG  +TK+P++      +    I GI +  L 
Sbjct: 146 KALALTYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLF 205

Query: 416 AFP-MGLHGVGIWFGLAAGLGTVAILLIARWSLRDRLGLVLR 456
           ++P +G  G G+   ++  +G VAIL +        L + L+
Sbjct: 206 SWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLK 247