Pairwise Alignments

Query, 401 a.a., ABC-type antimicrobial peptide transport system, permease component from Sphingobium sp. HT1-2

Subject, 654 a.a., pyoverdine efflux carrier and ATP binding protein from Pseudomonas putida KT2440

 Score =  223 bits (567), Expect = 2e-62
 Identities = 144/402 (35%), Positives = 221/402 (54%), Gaps = 26/402 (6%)

Query: 9   AFRAINRHKMRSFLTTLGIIIGVAAVVTMVTLGNGATAAVREQISSLGANVLQLRPGQGF 68
           A+R +  ++ R+ LT LGIIIGVA+VV M+ +G G+   V  Q+++ G+N+L L      
Sbjct: 270 AWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSNILYLNGS--- 326

Query: 69  GRGGGGPRPPNFKEA-------DLTAIENQLTGVRAVAPVVQSSGTAIYEGNNWSTTVYG 121
                   PP  +E        D+ AI  +L  V+ + PV+       +  N+    V G
Sbjct: 327 --------PPTLREPAGRITLDDVAAI-GELPQVKHIMPVLGEKMMVRHGNNSQQFYVGG 377

Query: 122 TTSAYSQVQSWNVSEGRLFMPDEEEAGKSVCIIGNTVRTNLFQ-GNDPIGKRMRIKGVSC 180
             + + ++ +W   EG  F   +E +  +V +IG  VR  +   G++PIG+ + I  V  
Sbjct: 378 NNTFFPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREKMLAPGSNPIGQYLLIGNVPF 437

Query: 181 QVVGVLATRG-QGGFGDQDDVVVMPIKFVQRRFTGDRDISQIMVAVDDAYDSATVQDSLE 239
           QVVG+LA +G   G  D D  +V+P      R  G RD   I +A  D+      + +++
Sbjct: 438 QVVGILAGKGASSGDQDSDGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQVKDTEAAID 497

Query: 240 QLMRERRKIKAGAEDNFNVFDTKQISDTLTGTTTILTQIVAAVAAISLLVGGIGIMNIML 299
           +L+R+R + K     +F + +   +      T   L+ ++ A+AAISLLVGGIG+MNIML
Sbjct: 498 RLLRQRHQGK----HDFELTNDAALIQAEARTQNSLSLMLGAIAAISLLVGGIGVMNIML 553

Query: 300 VSVTERTREIGIRLAIGAVAREVLMQFLVEAIVLSCMGGLIGLVIALIASVGIAPLMKVP 359
           ++V ERTREIGIR+A GA  R++L QFL EAI+LS +GGL G+ +AL+    +  L  + 
Sbjct: 554 MTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALALVVGASLT-LADIA 612

Query: 360 FTFDPQVNLIAFLFSAAIGVVFGYFPARRAASLNPIDALRHE 401
             F     + AF  +   GVVFG+ PAR+AA L+P+ AL  E
Sbjct: 613 VAFALPAIVGAFACAVITGVVFGFMPARKAARLDPVKALTSE 654