Pairwise Alignments

Query, 495 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 465 a.a., replicative DNA helicase (ATPase) from Pseudomonas putida KT2440

 Score =  310 bits (794), Expect = 7e-89
 Identities = 185/478 (38%), Positives = 275/478 (57%), Gaps = 34/478 (7%)

Query: 19  PRNVEAEAALLGALMIDNRIAEDVQLKLKPEHFFEPLHGRIYEAVMRLIERDMIANPVTL 78
           P ++EAE A+LG LM+DN   E V  ++    F+   H  I+ AV +L + +   + VTL
Sbjct: 21  PHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAVHKLADANQPFDVVTL 80

Query: 79  KPMLEQDPALKELGGAAYLAQLTGSGAALLGARDFATQIYDLALLRQLVNVGRELVDNAL 138
              L+++    ++GG AYLA+L  +  ++   + +A  I + A LRQL+++  ++ DNA 
Sbjct: 81  HEQLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADNAF 140

Query: 139 DTSEDVNPREQIELAEVALYKVSEGEGESGSVKSFLSASTMAVQVAERALNSGGHVSGIT 198
           +  +  N  E ++ AE  +++++E   ++G         TMA+   +   NS   ++GI+
Sbjct: 141 NP-QGRNAAEILDDAERQIFQIAEARPKTGGPVGVNELLTMAIDRIDTLFNSDSDITGIS 199

Query: 199 TGINSLNEKIGGLHNSDLMILAGRPGMGKTSLATNIAYNAASRWLRDHSDGIPPEKNMGA 258
           TG   L+EK  GL  +DL+I+AGRP MGKT+ A N+  NA  R                 
Sbjct: 200 TGYTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAVLR--------------TDK 245

Query: 259 KTAFFSLEMSADQLATRVLAEQSGISGEALRMGKISRADFQNLSRAARDLQELPLFIDDT 318
               FSLEM  + L  R+L+    I    +R G++   D+  L+ A   L +  LFIDDT
Sbjct: 246 AVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNDRKLFIDDT 305

Query: 319 PGLTIAALRTRARRLKRRH-DVGFIVVDYLQLLQGSGKAGDSRVNEISEISRGLKTLAKE 377
            G++ + +R R RRL R H ++  I+VDYLQL+Q  G AGD+R NEISEISR LK LAKE
Sbjct: 306 AGISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKE 365

Query: 378 LHVPVLALSQLSRAVEQREDKRPQLSDLRESGSIEQDADMVWFVFREDYYVAAKEPGNKE 437
            + PV+ALSQL+R++EQR +KRP  SDLRESG+IEQDAD++ FV+R++ Y          
Sbjct: 366 FNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVY--------HP 417

Query: 438 GPEHQEWVQEMERIYGLAEVIVAKQRHGSTGRIRMKFDAKITRFSDLAEGSSYLEDLE 495
             EH+          G+AE+I+ KQR+G  G +R+ F  K TRF +LA G    +D E
Sbjct: 418 ETEHK----------GVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE 465