Pairwise Alignments

Query, 560 a.a., Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007) from Sphingobium sp. HT1-2

Subject, 387 a.a., isovaleryl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 9e-56
 Identities = 124/390 (31%), Positives = 196/390 (50%), Gaps = 12/390 (3%)

Query: 170 NCGLDEMFDMVRDQFFALSNEKVAPFAHEWHLKDELIPLPLVQELGEMGVFGMTIPEEFG 229
           N  L E  DM+RDQ       ++AP A +    D L P  + ++ G+MG+ G+T+PEE+G
Sbjct: 7   NFALGETIDMLRDQVRTFVAAELAPRAAQID-HDNLFPADMWRKFGDMGLLGITVPEEYG 65

Query: 230 GLGMGKTAMCVVSEELSRGWIGVG-SLATRSEIAAELFLTGGTAEQKAHWLPQIANAAIL 288
           G G+G  A  V  EE+SRG   V  S    S +        GT EQK  +LP++ +   +
Sbjct: 66  GAGLGYLAHVVSMEEISRGSASVALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEHI 125

Query: 289 PTAVFTEPDTGSDLGALRTRATLADGEYRVSGNKTWITHAARADVMTLLVRTDPDTRNYS 348
                +EP+ GSD+ +++ RA      Y ++G+KTWIT+   A+   +  +TD D   + 
Sbjct: 126 GALAMSEPNAGSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHG 185

Query: 349 GLSMLIAPKQRGTVDTPFPTPGMSGGEIEVIGYRGMKEYEIGFDDFRVPAANLLGGVEGQ 408
             + ++    +G              + + +G RG    E+ FD   VPA N+LG + G 
Sbjct: 186 ITAFIVERDWKGF---------SRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNG- 235

Query: 409 GFKQLMATFESARIQTAARAIGVAQAALDIGLSYALDRKQFGRPIFDFPRVANKLAMMAA 468
           G + LM+  +  R+  +    G+ Q+ +D+ + Y  DRKQFG+ I +F  +  K+A M  
Sbjct: 236 GVRVLMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYT 295

Query: 469 EIMGARQLTYFAARRKDEDKRCDLEAGMAKLIGARVAWAAADNALQIHGGNGFATEYQVS 528
           ++  +R   Y  A+  D  +    +A    L  A  A   A  A+QI GGNG+  E+   
Sbjct: 296 QLNASRAYLYAVAQACDRGETTRKDAAGVILYTAERATQMALEAIQILGGNGYINEFPAG 355

Query: 529 RLLADARILNIFEGAGEIQAQVIARRLLDE 558
           RLL DA++  I  G  EI+  +I R L +E
Sbjct: 356 RLLRDAKLYEIGAGTSEIRRMLIGRELFNE 385