Pairwise Alignments

Query, 699 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Sphingobium sp. HT1-2

Subject, 600 a.a., penicillin-binding protein 2 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  191 bits (485), Expect = 9e-53
 Identities = 163/586 (27%), Positives = 259/586 (44%), Gaps = 73/586 (12%)

Query: 34  IGALLVGRMGWISIAENEKYQLLSESNRVNLTLIPPRRGWIVDRNGRPLANNRTDFRVDL 93
           +G +L+ ++  I + + + +   +E N V   +  P RG I DR+   L +N   F + +
Sbjct: 16  VGVILLTKLFMIQVVD-DSFLRRAERNAVQRIVDYPYRGLISDRHNELLVHNNPVFDLMV 74

Query: 94  IPQRIVDAEATVGHLAQLLSLQPDDVDRIKEELD---KSAGFRPVQVADKLTYDQFAAVS 150
           IPQ     E ++   A+   +   + +++ E      K +  +P  +  +++   FA + 
Sbjct: 75  IPQ-----EFSIEDTAKFCDIFQIEKEKLIERYTAAKKYSWVKPSPLIKQISTTDFAKIQ 129

Query: 151 VRLTDLPGVAPSQGFSRHYPAGATVGHLLGYVGAATAEDYKKRKDPLLITPGFKVGKDGL 210
             L D PG+       R YP  +  G  LGY+        + R      + G  +G  GL
Sbjct: 130 DYLIDYPGLFVMTRSVRAYP-DSIAGSALGYIAEIVPRQLE-RDTMHYYSQGDYIGHSGL 187

Query: 211 ERAYDEHLTGKPGAKRVEVTARG----KIVRELTTRPDTPGNPIKLTIDAGLQEYAGRRL 266
           E  Y++ L GK GAK   V  RG                 G  ++ TID  LQ+Y  + +
Sbjct: 188 ESYYEKILRGKKGAKYKMVNVRGVDKGSFKNGALDTASVAGLNLQSTIDLQLQKYGEKLM 247

Query: 267 ATQSGAVVVIDCHNGDVLACASMPSFDPNSFSDGISHLEWEMLSKDDHVPLRNKVLQGLY 326
             + G+VV I+   G++L+  S P +DPN  +       + +L  D   PL  + +Q  Y
Sbjct: 248 KGKRGSVVAIEPKTGEILSMISAPVYDPNLLAGAAYSKNYNVLLSDTTKPLFIRPIQAKY 307

Query: 327 PPGSTVKPMVALALLEAGV-SPAETVSCGGAIRVGNTLFHCHKKRGHGPLNMRGAIAQSC 385
           PPGS  K + +L  L+ G+ +P  T +C  A      L  CH      P+N+ GAI  SC
Sbjct: 308 PPGSIFKVVQSLIGLQWGILTPNTTFACNKA------LVACHNH--PSPVNLFGAIRNSC 359

Query: 386 DIYFYQMAQ---------------RIGMDRIASMARRVGMGQRFDLPFPSQSYGTVPDPT 430
           + Y+YQ  +               +IG+D+      + G+G +  +  P ++ G+VP   
Sbjct: 360 NPYYYQAFRQMINQDVSTNTYTDTQIGLDKWHEAVEKFGLGHKLGVDLPYENSGSVPSSQ 419

Query: 431 WKLKKYNQ-KWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFLHGAARPEPA 489
              + Y + +W+     + +IGQG ML+ PLQMA +AA  A         L  A   +P 
Sbjct: 420 LYNRIYGEGRWKYSTIYSLSIGQGEMLVTPLQMANLAAIFANKGYYYTPHLIKAINGDPN 479

Query: 490 L----------VGVPEEHLVTIRDAMSAVVNGGGTGGAARMSIPDVLIAGKTGTAQVRRI 539
                      VGV   H   + DAM+  +     G A R  I D+ IAGKTGTAQ    
Sbjct: 480 NIPEEYTTKHDVGVSAHHFDMVHDAMAEAL----YGTAMRAIIKDITIAGKTGTAQ---- 531

Query: 540 TMAERAGGVRGNAGLPFKLRDHALFQGFAPFDNPRYAIACIIEHGG 585
                     G         DH++F  FAP ++P+ AIA  +E+ G
Sbjct: 532 -------NPHG--------EDHSVFVAFAPKEDPKIAIAVYVENAG 562