Pairwise Alignments

Query, 160 a.a., RNA-binding protein Hfq / RNA-binding protein Hfq from Sphingobium sp. HT1-2

Subject, 182 a.a., RNA-binding protein Hfq from Acinetobacter radioresistens SK82

 Score = 75.1 bits (183), Expect = 6e-19
 Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%)

Query: 4  KVNNLQDIFLNSLRKSKTPVTMFLVKGVKLQGIITWFDNFSVLLRRDGQSQLVYKHAIST 63
          K   LQD FLNSLRK + PV++FLV G+KLQG I  FD + VLL ++  SQ+VYKHAIST
Sbjct: 3  KGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLL-KNTVSQMVYKHAIST 61

Query: 64 VMPAQ 68
          V+PA+
Sbjct: 62 VVPAR 66



 Score = 64.7 bits (156), Expect = 8e-16
 Identities = 33/63 (52%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 84  KPRLLQEIFLSAVRKSGSPVTMFLVNGVMLQGEIAAFDLFCMLLERDGMVQLVYKHAIST 143
           K + LQ+ FL+++RK   PV++FLVNG+ LQG I +FD + +LL ++ + Q+VYKHAIST
Sbjct: 3   KGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLL-KNTVSQMVYKHAIST 61

Query: 144 VQP 146
           V P
Sbjct: 62  VVP 64