Pairwise Alignments

Query, 360 a.a., Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake from Sphingobium sp. HT1-2

Subject, 374 a.a., DNA-protecting protein DprA from Escherichia coli ECRC62

 Score =  156 bits (394), Expect = 1e-42
 Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 8/293 (2%)

Query: 73  YLLMGDAD-YPALLAEMEGAPPALIVRGDAAIAARPCIAMVGARNASAAACRFARILAQQ 131
           +L+  D++ YP  L      P AL V G+        +A+VG+R  S    R+ R+  + 
Sbjct: 73  HLIPADSEFYPPQLLMTTDYPGALFVEGELHALHSFQLAVVGSRAHSWYGERWGRLFCET 132

Query: 132 LGDRGAVVVSGLARGIDTEAHRGS--IDSGTIGVIASGIDIGFPPENAALQEDVAQRG-L 188
           L  RG  + SGLARGID  AH+ +  ++  +I V+ +G++   P  +A L   + + G  
Sbjct: 133 LATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHARLAASLLEHGGA 192

Query: 189 LVTEHPPGTQPLARHFPARNRIIAGLALGTVVVEAAPKSGSLITARLATEAGREVMAVPG 248
           LV+E P    PLA +FP RNRII+GL+ G +VVEAA +SGSL+TAR A E GREV A+PG
Sbjct: 193 LVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCALEQGREVFALPG 252

Query: 249 SPLDPRAQGCNLLIREGATLVQNADDILEAVG-GLDPRMVRQGSFDFIGQPVSSDVADAD 307
              +P ++G + LI++GA LV   ++ILE +  GL    +     +    P   DVA   
Sbjct: 253 PIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGL--HWLPDAPENSFYSPDQQDVA-LP 309

Query: 308 RAAVIALLGPVAVAVDEIIRLSGLSPAIVQTVLLELELAGGLERQAGGRVSLR 360
              ++A +G     VD +   +G     V T LLELELAG +    GG V LR
Sbjct: 310 FPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVRLR 362