Pairwise Alignments

Query, 396 a.a., Capsular polysaccharide biosynthesis/export periplasmic protein WcbC from Sphingobium sp. HT1-2

Subject, 377 a.a., polysaccharide export protein from Erwinia tracheiphila SCR3

 Score =  107 bits (268), Expect = 4e-28
 Identities = 95/384 (24%), Positives = 170/384 (44%), Gaps = 48/384 (12%)

Query: 23  LAGCSSLGASGPTSSS---VKNAGQESVANAPIKVVDLNA----DVASRVMAANKTVEFA 75
           L+GC+ +  S  ++S    +K    +   +  + V  L       + SR + A    E  
Sbjct: 18  LSGCTVVPGSTLSTSGKDVIKQQDSDFDIDKYVNVFPLTPALVEQLRSRPIVAKPNPELQ 77

Query: 76  EALGDGRAAGTTVGLGDALDIAIWEAPPASLFGTMVPDSRIPSSSSGLARSASLPEQMVD 135
            AL   +     +G+GD L + +W+ P  +             + +G  RSAS     V 
Sbjct: 78  NAL---QRYEYRIGVGDVLTVTVWDHPELT-------------TPAGQYRSASDTGNWVH 121

Query: 136 TEGRISIPFAGSIQVVGLTPQQVGQAIVARLRGKAHNPQVVVRLSRVVNNNVTVVGDVSE 195
           ++G I  P+ G + V G T Q++   I +RL     +PQV V ++   +    V G+V+ 
Sbjct: 122 SDGSIFYPYIGRVVVAGRTVQEIRSEIASRLAQYIESPQVDVSVASFKSQKAYVTGEVTT 181

Query: 196 NARVALTPKGERLLDVLASVGGVKQPVGKTLIQITRGAQTATMPLEAVIKNP--RQNIRL 253
           + +  +T     LLD + + GG+        + +T       + L+A+++N    QN  L
Sbjct: 182 SGQQPITNVPLTLLDAINAAGGLTATADWRNVVLTHNGNEMPISLQALMQNGDLSQNHLL 241

Query: 254 QSDDIVTALFQP----FSFTALGATGNSAEINFEGTGLTMAQALGRVGGLRDDRADVRGV 309
              DI   L+ P         +G     A +  + +G+T+A+ALG   G+    AD  GV
Sbjct: 242 YPGDI---LYVPRNDDLKVFVMGEVKQPATLKMDRSGMTLAEALGNAQGMAQTAADATGV 298

Query: 310 FIFRLERPEALDPAVAATAQKTPDGKIPVIYRLDLKNPASFFIAQGFPVQNKDVLYISNA 369
           F+ R        P   A        KI  IY+L++K+ ++  +   F +Q  D++Y++  
Sbjct: 299 FVIR--------PVKGANR-----SKIANIYQLNVKDASAMVMGSEFQLQPYDIVYVTAT 345

Query: 370 PLADIQKFVNIISQMAFSIININN 393
           PL+   ++  ++SQ+  +I  I N
Sbjct: 346 PLS---RWNRVLSQLVPTIAGIYN 366