Pairwise Alignments

Query, 520 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 561 a.a., putative Phage terminase, large subunit from Pseudomonas putida KT2440

 Score =  295 bits (756), Expect = 2e-84
 Identities = 188/489 (38%), Positives = 260/489 (53%), Gaps = 13/489 (2%)

Query: 23  FVEALVHIKGQWAG--QPIRLEPFQVWIIANIFGWVRKSDGLRRFRSAFVLLPRKSGKSL 80
           F++ L H KG+W G  Q I+LEP+Q++ +   FGWVRK DG RR+R+  V +PRK+GKS+
Sbjct: 56  FLQLLPHTKGKWGGKKQLIKLEPWQLFSVCVPFGWVRKKDGTRRYRTILVFVPRKNGKSI 115

Query: 81  IAAAIALYMTFADGEPGAEGYTGASNLAQANEVFTPAKRMAELSPHFLETFGVEVMAKSV 140
           I   + LYM  ADGE GAE Y+GA+   QA EVF PAK M E +    E +GV+V A ++
Sbjct: 116 IGGGVGLYMFVADGEFGAEVYSGATTEKQAWEVFRPAKLMVERTDDLREHYGVDVNASNM 175

Query: 141 FCEATGQSFVPVIAKTKDGSSPHLAICDELHQAIDDTQIQAFRTGMGARRQPLLLVISTA 200
              A G  F PVI K  DGSSP  ++ DE H+  D T      TGMGAR QP++LVI+TA
Sbjct: 176 VVLADGSRFEPVIGKPGDGSSPSCSVVDEYHEHQDSTLYDTMETGMGAREQPIMLVITTA 235

Query: 201 GTNLAGVCRTEQLAAEAVLRGGSIDDKLFAAIWTIDADDDWRDFDSWIKANPAIGASLSE 260
           G+++ G C      +E +L G      L+ A++TID  DDW    +  KANP  G S++E
Sbjct: 236 GSSIGGPCHQLIRDSERMLEGVIDRPDLWPALYTIDQGDDWTSEIALRKANPNFGISVAE 295

Query: 261 EFLRDKLNEALQSPAKAAAARTKHLNEWVASAAGWLNQNDWANAADPTLDIMA-LAGRPA 319
           +FL  +  +A+QS  K A  RTKHLNEWV +   WLN   W  A  P    +A L GR  
Sbjct: 296 DFLLARQRDAMQSATKQATFRTKHLNEWVGAKNAWLNMLRWKEA--PVRKSLAELEGRSC 353

Query: 320 FLAADLSTKQDLTSINAAVPL--DDGRLAIFPWCMAPEGAVTN--SPNSSAYAEWVERGD 375
           + + DL++K D+ +     P   DD    I      PE  V      N++ Y E+   G 
Sbjct: 354 YGSLDLASKIDIAANLLIFPPHGDDPFWHIHARYYLPEARVLEELDSNTARYREFDALGL 413

Query: 376 LIQTPGSASSFAEAEERLEWLRQHFDVKVAVFDQWQGEAVRQRYEAAGVPTMIWQANNRG 435
           L  T G  + F   +E +      FD++   +D WQ   + Q  +A G+P M+       
Sbjct: 414 LTLTDGEVTDFEVIKEDMREFAGRFDIRAYAYDPWQATQLAQEMDAEGLP-MVELRQTVQ 472

Query: 436 AWTMAMDDFEADLKNGLVVHPGNAVLDWCAANICASTRGVTRI-PVKPSGQDHLKIDAMV 494
             +  M + EA +    + H    VL W A+N+ A       I P K   ++  KID MV
Sbjct: 473 NLSEPMKEVEALVLQRKLAHGDCPVLTWMASNVVAKLDVKDNIYPNKERPEN--KIDGMV 530

Query: 495 ATIMAYAAA 503
           + I   A A
Sbjct: 531 SLITGCAVA 539