Pairwise Alignments

Query, 400 a.a., Phage integrase from Sphingobium sp. HT1-2

Subject, 409 a.a., integrase arm-type DNA-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  320 bits (819), Expect = 6e-92
 Identities = 179/403 (44%), Positives = 249/403 (61%), Gaps = 14/403 (3%)

Query: 1   MALSALALSKAKPREKPYKLADGHGLYLLVTPQGGRYWRMNYRFDGKAKTMAMGVFPLIT 60
           MALS   + KAKP +KP +L DG GLYL V P GG++WR+ YRF GK K +++G +P   
Sbjct: 1   MALSDATVRKAKPSDKPQRLFDGGGLYLEVAPSGGKWWRLKYRFGGKEKRLSLGTYPDTG 60

Query: 61  LAEAREKREDARKLLAAGSDPCAKRKEIEAQEAFEATTGFRIVAEEWLAKREREGLGDIT 120
           LA+ARE+R+ ARKLLA G DP  +RK  +A     A   F +VA EWLA ++ E      
Sbjct: 61  LADARERRDAARKLLAQGVDPGVQRKAEKAAGVDRAANSFEVVAREWLAVKKPEWTAGQF 120

Query: 121 IGKIKWLLEFAYPSLGDRKIGEITSMELLAVLRQVEGRGRHETARRLRSVCGRVFRYAIA 180
             +   L   A+P +G   + +I   E+  +   +  +G  E A RLR    RVFR+A+A
Sbjct: 121 AKECGRLENHAFPRIGALPVADIGVGEIRPLFAYLIKQGHIEQAHRLRHQLSRVFRFAVA 180

Query: 181 TGRAEHDLSANLRDALTTPKVKHLAAITSSQQVGPLLRAIDGFDGHAVTKAALRLAPHVF 240
           T RA  D +A+LRD L +   ++   IT  ++VG L+RAIDGF G    + AL+LAP  F
Sbjct: 181 TERASRDPAADLRDTLPSRNPQNHPTITDPERVGELMRAIDGFTGTLPVQCALKLAPLWF 240

Query: 241 VRPGELRHAEWP--EIDFEKALWSIPAEKMKMRR---------PHRVPLSRQSLTILSSI 289
            RPGE+R AEW   ++D E   +++P    K+++         PH VPLSRQ+L IL  +
Sbjct: 241 CRPGEIRMAEWTHFDLDGEHPSYTVPPMNRKLKKAAKENPSTPPHIVPLSRQALEILREL 300

Query: 290 REVTGAGKFVFPGFQSLKRPMSENALNGALRRLGYSGDEMTSHGFRAMASTLLNEMGKWH 349
           R++TG G+++FPG +  KR MS+ A+N AL R+GY G  +T HGFR MA TLL E+G W+
Sbjct: 301 RQLTGHGRYLFPGARDPKRHMSDGAVNAALARIGYKG-IITGHGFRHMARTLLGELG-WN 358

Query: 350 PDAIERQLAHAEADAVRRAYARGEYWEERVVMMQAWSDYLDEL 392
           P+A+ERQL+H E   V   Y + ++  ER  +MQAW+DYLD L
Sbjct: 359 PEALERQLSHKE-PGVAGVYNKAQHLPERRKVMQAWADYLDSL 400