Pairwise Alignments

Query, 340 a.a., Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) from Sphingobium sp. HT1-2

Subject, 435 a.a., Replication-associated recombination protein A from Alteromonas macleodii MIT1002

 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 30/216 (13%)

Query: 19  AALRPKSLDEFVGQQ---AARENLRIFIQAARTRGEALDHVLFFGPPGLGKTTLAQIVAK 75
           A +RP +++++ GQ+      + LR  ++A          ++ +GPPG GKTTLA+++A+
Sbjct: 13  ARMRPVTIEQYSGQEHLLGEGKPLRKMLEAGHCHS-----MILWGPPGTGKTTLAELIAQ 67

Query: 76  EMGVGFRATSGPVIAKSGDLAALLTNLDEG------DVLFVDEIHRLNPAVEEVLYPAME 129
                    S  V +   D+ A +   +E        +LFVDE+HR N + ++   P +E
Sbjct: 68  YTNASVLRISA-VTSGVKDIRAAMDTAEENARYNQRTLLFVDEVHRFNKSQQDAFLPFVE 126

Query: 130 DRALDLM--IGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDR-------------FG 174
              +  +    E PS    +  L R  +    T +    + L DR              G
Sbjct: 127 SGVVTFIGATTENPSFELNKALLSRVRVYVLKTLEHEALSELIDRALRDTEKGLGDRALG 186

Query: 175 IPVRLQFYTVDELELVVRRAARLLDLAITSDGAIEI 210
           I    +   +D      RR    L+LA    GA EI
Sbjct: 187 IEETARNALIDLSGGDARRLLTYLELAADFTGANEI 222