Pairwise Alignments

Query, 532 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Sphingobium sp. HT1-2

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 102/386 (26%), Positives = 145/386 (37%), Gaps = 63/386 (16%)

Query: 86  LLWPR----PHDEPAEL-DDGSLSLSAIIDRLHNVSRAAAPDALAQMMDHLDASGRFALL 140
           ++W R    PHDEP +    G L  + + ++L                     SG +AL+
Sbjct: 105 IVWDRGIWQPHDEPRKAYAAGKLKFTLVGEKL---------------------SGDWALV 143

Query: 141 KLATGGLRVGISARLAKTGSAQAFGLDVDDVEQVWHALAPPYAALFDWAEGR-SGRPDPE 199
           +    G        L K    QA   D  D+ Q     A P + L D + G+   R    
Sbjct: 144 RTRLKGSGDKEQWLLIKEKDPQARSADDYDIVQ-----AQPNSVLSDASVGKPKTRAKAR 198

Query: 200 GTPYFRPFMLAHPLEADSVDLADYAAEWKWDGIRIQIVGTGRETRLYSRAGDDITGSFPE 259
            T     F        D     D+  E K+DG R+       E RL++R G D T   P 
Sbjct: 199 KTALPEQFTPQLATLVDRAPEGDWQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTECLPR 258

Query: 260 IAQAFTGHAV----LDGELLVKGEFQGAKEHGGAAASFNALQQR--LGRKAVSAKMMADY 313
             +A     +    LDGE++          +G     F ALQ    +GR       + D 
Sbjct: 259 QVKALQALKLKDSWLDGEVV--------SLNGDGLPDFQALQNAFDIGRSLDIVYYLFDA 310

Query: 314 PAFVRLYDLLIEGDDDLRALPWTQRRARLEAYMAQLSPDRFDLSAVIDAPDFAALADIRA 373
           P             +D R  P  +RRA L+  +A         S    A       DI  
Sbjct: 311 PFL---------NGEDRRQAPVEERRAALKEALAGSRSTLLRYSEAFTAHH----RDIFE 357

Query: 374 GARDAAIEGVMLKRRDSPYVAGRKAALWYKWKRDPLTADCVMMYAQRGHGKRSSFYSDYT 433
            A D A+EGV+ KR  SPYV+ R++A W K K   L+ + V++   R  G RS F +   
Sbjct: 358 SACDLALEGVIGKRLGSPYVS-RRSADWIKLK-CRLSQEFVIVGYTRPQGSRSGFGA--L 413

Query: 434 FGCWTEDGELLPVGKAYSGFTDEELK 459
                 D  L+  G+  +GF    LK
Sbjct: 414 LLAVNNDTGLVYAGRVGTGFDQAALK 439