Pairwise Alignments

Query, 514 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 453 a.a., polygalacturonase from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 113/441 (25%), Positives = 165/441 (37%), Gaps = 96/441 (21%)

Query: 53  AINAAILAASQAGGGTVLLPRGRYLCFSIRLKSHVTLVIGEGAVIEAADPARHAGRYDLP 112
           AI  AI A S AGGG V L  GR++   + LKS V L + E AV+    P      Y L 
Sbjct: 22  AIQQAIDAVSSAGGGRVSLSAGRHVSAGLHLKSGVELHLAEDAVLA---PVSDYDAYALT 78

Query: 113 ETGIDQLYQDFGHSHWHNSLIWCEDLVEVAILGPGMIHGLG---LTRDGPGARWKKQAGE 169
              +     D G       +I       +A+ GPG I   G   +  D         A +
Sbjct: 79  RVSVIAEDSDRG-------MIIANGASNIAVTGPGRIEAGGENFIIGDDAAMGTYVPAKK 131

Query: 170 RPLSMRGMSDAQIAELEPDAAKMNGLGNKAIALKNGRDIHLSGFSILKGGHFAIIATGTQ 229
           RP                          + + L+  R++ L   ++     + +     +
Sbjct: 132 RP--------------------------RVMVLEACRNVRLENLNVSASPMWTLHMVNCE 165

Query: 230 QLRIDNLAIDTER-----DGIDLDCVRDVVVERCRVNSPNDDGIVVKSSYAL-GRAI-AS 282
            L   NL I+ +R     DGI LD  R  ++E C + S  DDGI +K+S    G+A+   
Sbjct: 166 DLHFRNLRIENDRRLPNTDGIVLDACRRALIEDCFI-STADDGICLKTSAGPDGKAVGVC 224

Query: 283 ENILIRDCDVSGYDMGSMLDGTKRSTQQIAPDQDRVTGRIKLGTESNGGYRNIRIEDCRF 342
            +I +R C VS                        ++  +KLGTES G + N+  EDC+ 
Sbjct: 225 ADITVRGCTVSS-----------------------MSCALKLGTESFGDFTNVVFEDCKV 261

Query: 343 TRC-RGLALETVDGGVMENIVARRLTMR------------EVTTAPIFLRIGDRRRGPDG 389
            +  RG+ L + DGG M NI   R+               E  T  +  R  +R+ G   
Sbjct: 262 VQSNRGIGLFSRDGGAMRNIRFSRIETECHETPGGFWGSGEAVTVTVVDRRPERQAG--- 318

Query: 390 TGIGAITGVEISEVDARGIDHRFAASIAGLPGHPVRDVTLRDVHLVYQGG--GTAQDAAR 447
                   VE   V+  G     A ++       + +V L  + L  Q G  GT      
Sbjct: 319 -------RVENLVVEDLGGSMEGAINLVSTSKAGIHNVRLERITLAQQPGKLGTGLQYDL 371

Query: 448 RPAELADAYPEPSMFGVLPSW 468
           RP   AD  P     G   +W
Sbjct: 372 RPTN-ADIAPSAEAAGRANAW 391