Pairwise Alignments

Query, 170 a.a., type VI secretion system contractile sheath small subunit from Ralstonia solanacearum UW163

Subject, 169 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  137 bits (346), Expect = 7e-38
 Identities = 75/167 (44%), Positives = 103/167 (61%), Gaps = 4/167 (2%)

Query: 6   SVQKRLQKVRPPRVQLTYDVEKGDAIEQKELPFVVGVVADLSGQSEVPQPKLRDRKFVNV 65
           SV ++L++VR PRV + Y+VE   A+  KELPFVVGV+ D SG    P     +RKFV +
Sbjct: 3   SVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQPLKPFGERKFVQI 62

Query: 66  DRDNFDDVMSAVEPRAAFQVPNTLTEEGGRFGVDLKFRSLEDFAPEAVVNQIEPLRQLLE 125
           DRDNFD+VM  + P     V NTL ++G    V+LKF S++DF P AVV Q+  L+ LL+
Sbjct: 63  DRDNFDEVMRRMTPGLNISVANTLQKDGTDMQVNLKFESMDDFEPGAVVQQVPALKALLD 122

Query: 126 ARSKLADLRNKLAGNDKLEDLLSDVLNNTEAL----QKLGAKNAGGE 168
           AR++L DL +K   ++ LE +L D+L N   L     +L  KN   E
Sbjct: 123 ARNELRDLLSKADRSEDLERMLEDILQNKTDLATLVSELKEKNGASE 169