Pairwise Alignments

Query, 1331 a.a., ATP-dependent RNA helicase HrpA from Ralstonia solanacearum UW163

Subject, 1300 a.a., RNA helicase HrpA from Enterobacter asburiae PDN3

 Score = 1133 bits (2931), Expect = 0.0
 Identities = 609/1307 (46%), Positives = 853/1307 (65%), Gaps = 59/1307 (4%)

Query: 36   RRPRRQKPTPEALAAALEARRA----RANAVPPIAFPEALPVSARRDEIAQAIAAHQVVI 91
            + P  Q+   + +A  +E        R  A P I +PE LPVS ++ +I +A+  HQVVI
Sbjct: 38   KNPDAQQAIYQEMAKEIEQAAGKVVLREAARPAITYPENLPVSQKKQDILEAVRDHQVVI 97

Query: 92   VSGETGSGKTTQLPKICLSIGRGIGAGGTGLIGHTQPRRIAATSTAKRIAQEIGSPLGEH 151
            V+GETGSGKTTQLPKIC+ +GRG+     GLIGHTQPRR+AA + A RIA+E+ +  G  
Sbjct: 98   VAGETGSGKTTQLPKICMELGRGL----KGLIGHTQPRRLAARTVANRIAEELQTEPGGC 153

Query: 152  VGYQVRFNDTLSAGASVKLMTDGILLAETQNDPLLRAYDTIIIDEAHERSLNIDFLIGYL 211
            +GY+VRF+D +S    VKLMTDGILLAE Q D LL  YDTIIIDEAHERSLNIDFL+GYL
Sbjct: 154  IGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYL 213

Query: 212  KQLLPRRPDLKVIITSATIDAQRFAEHFAGLNGQKGPAPVIEVSGRLYPVEVRYRPVQRD 271
            K+LLPRRPDLK+IITSATID +RF++HF         AP+IEVSGR YPVEVRYRP+  +
Sbjct: 214  KELLPRRPDLKIIITSATIDPERFSKHFNN-------APIIEVSGRTYPVEVRYRPIVEE 266

Query: 272  EKDKERDLYDGIVDAVDELAREGAGDVLIFLPGEREIREAAEALRKHHPAHTEILPLFAR 331
              D ERD    I DAVDEL  E AGD+LIF+ GEREIR+ A+AL K    HTEILPL+AR
Sbjct: 267  ADDTERDQLQAIFDAVDELGNESAGDILIFMSGEREIRDTADALSKRDLRHTEILPLYAR 326

Query: 332  LSVQEQERVFRPSNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIE 391
            LS  EQ RVF+P   RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IE
Sbjct: 327  LSNSEQNRVFQPHGGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIE 386

Query: 392  PVSQAAANQRAGRCGRVADGVCIRLYEEADFIARPRFTDPEILRSSLAAVILRMKALRLT 451
            PVSQA+ANQR GRCGRV++G+CIRLY E DF++RP FTDPEILR++LA+VIL+M AL L 
Sbjct: 387  PVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLG 446

Query: 452  DVEQFPFIEPPLGRAIADGYQLLQELGAVD-DENA----LTPLGKQVARLPLDPRVARMI 506
            D+  FPF+E P  R I DG +LL+ELGA+  DE A    LTPLG+Q+++LP+DPR+ARM+
Sbjct: 447  DIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQATVYKLTPLGRQLSQLPVDPRLARMV 506

Query: 507  LAGRDHQCLREMLVIASALSVQDPRERPQELQQQADQAHRQFADEKSEFLGWVKLWKWFE 566
            L  + H C+RE ++I SALS+QDPRERP + QQ +D+ HR+F D++S+FL +V LW +  
Sbjct: 507  LEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG 566

Query: 567  EAVAHKKSNKQLQDQCRSHFLSHLRLREWRDVHSQLHTTVAEQGWKLNESDPTYEQLHLA 626
            E      SN Q + QCR  FL++LR+REW+D+++QL   V E G  +N     Y ++H+A
Sbjct: 567  EQQKALSSN-QFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIA 625

Query: 627  LLTGLLGNIGVRIEEADGKGREYLGARGIKFFLWPGSVIARKAGKWVVGGELIETSRLFG 686
            LLTGLL +IG++    D + +EY GAR  +F ++PGS + +K  KW +  EL+ETSRL+G
Sbjct: 626  LLTGLLSHIGMK----DAEKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWG 681

Query: 687  RTLARIEPEWVEKVGAHLLKVSWSDPHWEKKAGQVMAFERGTLYGLPVYQQRRVHFGPMQ 746
            R  ARI+PEWVE V  HLLK S+S+PHWE+  G VMA E+ T+YGLPV   R+V++  + 
Sbjct: 682  RIAARIDPEWVEPVAQHLLKRSYSEPHWERAQGAVMATEKVTVYGLPVVAARKVNYSQID 741

Query: 747  PKEARELFIRRALVDGEFETRLPFFAHNQRLVREIENLEHKSRRQDVLVDDELIHAFYDS 806
            P  +RELFIR ALV+G+++TR  FF  N +L  E+E LEHKSRR+D+LVDDE +  FYD 
Sbjct: 742  PALSRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDEALFEFYDQ 801

Query: 807  QLPADIHNAVAFEHWYAEAAKASQKLLYLNRDDLMRHEAAGITTDLFPKTLPIAGIDMGL 866
            ++  ++ +A  F+ W+ +A+K +  LL   +  L++  A  ++   +P       + + L
Sbjct: 802  RISHEVISARHFDSWWKKASKETPDLLNFEKSMLIKEGAESVSKLDYPNFWHQGNLKLRL 861

Query: 867  TYHFEPGSPRDGVTLTVPLYALNQVPAQRAEWLVPGMLKEKVHLLLKSLPQKLRRHCVPL 926
            TY FEPG+  DGVT+ +PL  LNQV     EW +PG+ +E V  L+KSLP+ +RR+ VP 
Sbjct: 862  TYQFEPGADADGVTVHIPLPLLNQVDEGGFEWQIPGLRRELVIALIKSLPKPVRRNFVPA 921

Query: 927  PDYAAGFVSRVRLGDGDLLDRLIADVREQTGTPLKRADFKLETLPAHHFMNFKVIDEHGR 986
            P+YA  F+ RV   +  LLD L  + R  TGT + R D+  + +P H  ++F+V+D+  +
Sbjct: 922  PNYAEAFLGRVTPLELPLLDALEREFRRMTGTTIDREDWNWDQVPDHLKISFRVVDDKNK 981

Query: 987  QLDMGRNLAQLRAELGGRAQQTFQSIAAQDAAVAGAQGDGAGTKPGKVGKPDAPATPALY 1046
            +L  GR+L++L+  L G+ Q+T  ++A           DG                    
Sbjct: 982  KLLEGRSLSELKEALKGKVQETLSAVA----------DDGIEQN---------------- 1015

Query: 1047 AGLTTWNFGALPELLEVRKGSQTLFGYPALVDGGDHCDVEVFDDPAEAARIHRLGLRRLF 1106
             GL  W+FG LPE  E ++G+  +  +PALVD  D   +++FD+P E  ++   GLRRL 
Sbjct: 1016 -GLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQMMWRGLRRLL 1074

Query: 1107 ALQLREPLKYLEKNIPGLSQMAIQFMNLGTQDELRSQILDATLERACLQ--DPLPTDDAT 1164
             L +  P+KYL + +P  +++ + F   G   +L    +   +++   +   P+ T++  
Sbjct: 1075 LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIHEAGGPVWTEEG- 1133

Query: 1165 FGARKDESRARLTLLAQEIARLAGAILAEYAQLPRKL--QIAKPFGAAYADIDAQLKALM 1222
            F    ++ RA L     EIA+    IL     + ++L  ++        +D+ AQ+  L+
Sbjct: 1134 FAQLHEKVRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDVKAQMAGLV 1193

Query: 1223 HKRFIEATPYAQLAHFPRYLKGIALRIDKLKADPTRDAQRMQEMAPLLQQYQRAEKQLRV 1282
            ++ F+    + +L    RYL+ I  R++K+  DP RD  +M ++  + Q +Q+   +L  
Sbjct: 1194 YRGFVTGNGFKRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPP 1253

Query: 1283 QGQGGTDPRMEEFRWMLEELRIALFAQELRTPVPMSVKRLQKVWESM 1329
              +   D  ++  RWM+EELR++ FAQ+L TP P+S KR+ +  E +
Sbjct: 1254 ARRDDED--VQAIRWMIEELRVSFFAQQLGTPYPISDKRILQAMEQI 1298