Pairwise Alignments

Query, 885 a.a., DNA mismatch repair protein MutS from Ralstonia solanacearum UW163

Subject, 853 a.a., DNA mismatch repair protein (NCBI) from Escherichia coli BW25113

 Score =  858 bits (2218), Expect = 0.0
 Identities = 462/868 (53%), Positives = 600/868 (69%), Gaps = 27/868 (3%)

Query: 18  FDKHTPMMQQYLKLKSAHPHTLVFYRMGDFYELFFEDAEKAARLLDITLTSRGSTNGQPI 77
           FD HTPMMQQYL+LK+ HP  L+FYRMGDFYELF++DA++A++LLDI+LT RG++ G+PI
Sbjct: 7   FDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPI 66

Query: 78  RMAGVPFHAVEQYLAKLVKLGESAAICEQIGDPATTKGPVERKVVRVVTPGTLTDAALLS 137
            MAG+P+HAVE YLAKLV  GES AICEQIGDPAT+KGPVERKVVR+VTPGT++D ALL 
Sbjct: 67  PMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQ 126

Query: 138 DKVNNHLLAIAQIPGKRGAAPLVGLAWLNLVGGELRLME-CSADQLDRELERIRPAEVL- 195
           ++ +N L AI Q    +G     G A L++  G  RL E    + +  EL+R  PAE+L 
Sbjct: 127 ERQDNLLAAIWQ--DSKG----FGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY 180

Query: 196 -SDDATLSAIAYDVARTRLPDWHFDVEAGARRLREQLGVASLVAFGAETLTAALAAAGAL 254
             D A +S I       R P W F+++   ++L  Q G   LV FG E     L AAG L
Sbjct: 181 AEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL 240

Query: 255 LNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESPTLFSLLDTCST 314
           L YA  TQ  +L H+  +T+E E + I +D ATRRNLE+T+ L G    TL S+LD   T
Sbjct: 241 LQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVT 300

Query: 315 SMGSRLLRHWLHHPLRDRAVPQARQQAIEVLLAGDWQS-LRGTLRTLSDVERITGRLALL 373
            MGSR+L+ WLH P+RD  V   RQQ I  L   D+ + L+  LR + D+ERI  RLAL 
Sbjct: 301 PMGSRMLKRWLHMPVRDTRVLLERQQTIGALQ--DFTAGLQPVLRQVGDLERILARLALR 358

Query: 374 SARPRDLSSLRDTLARLPEVRDQLPQSDAAPLLGDLHAALAIPEDAHALLQHAVMAEPAA 433
           +ARPRDL+ +R    +LPE+R QL   D+AP+   L   +    +   LL+ A++  P  
Sbjct: 359 TARPRDLARMRHAFQQLPELRAQLETVDSAPVQA-LREKMGEFAELRDLLERAIIDTPPV 417

Query: 434 MVRDGGVIARGYDADLDELRDISENCGQFLVDLEARERERTGIANLRVEYNRVHGFYIEV 493
           +VRDGGVIA GY+ +LDE R +++    +L  LE RERERTG+  L+V +N VHG+YI++
Sbjct: 418 LVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQI 477

Query: 494 TNGQAAKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQDRALSREKSLYEDLLQKLLP 553
           + GQ+   P +Y RRQTLKNAERYI PELK +EDK L+++ +AL+ EK LYE+L   LLP
Sbjct: 478 SRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLP 537

Query: 554 HLPAFKRIAAALAQADVLATLAERAHALSWSCPALTDAPGIELIRARHPVVEQQV-EQFV 612
           HL A ++ A+ALA+ DVL  LAERA+ L+++CP   D PGI +   RHPVVEQ + E F+
Sbjct: 538 HLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFI 597

Query: 613 ANDCVLQETRKLLLITGPNMGGKSTFMRQTALVVLLAYVGAFVPADAATIGPIDRIFTRI 672
           AN   L   R++L+ITGPNMGGKST+MRQTAL+ L+AY+G++VPA    IGPIDRIFTR+
Sbjct: 598 ANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRV 657

Query: 673 GAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLMDEIGRGTSTFDGLALAWAIARHLLS 732
           GAADDLA GRSTFMVEMTE A ILH AT  SLVLMDEIGRGTST+DGL+LAWA A +L +
Sbjct: 658 GAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLAN 717

Query: 733 HNRSHTLFATHYFELTQLPQEFAQASNVHLSAVEHGDGIVFLHAVQEGPASQSYGLQVAQ 792
             ++ TLFATHYFELTQLP++    +NVHL A+EHGD I F+H+VQ+G AS+SYGL VA 
Sbjct: 718 KIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAA 777

Query: 793 LAGVPQPVIRAARKRLAWLEQHSADTGATPQLDLFALPGDPSDDDDDDATEAAAPAASSA 852
           LAGVP+ VI+ AR++L  LE  S +  AT               D    +  + P  +S 
Sbjct: 778 LAGVPKEVIKRARQKLRELESISPNAAAT-------------QVDGTQMSLLSVPEETSP 824

Query: 853 LTEALADIDPDAMTPREALDVLYRLKAL 880
             EAL ++DPD++TPR+AL+ +YRLK+L
Sbjct: 825 AVEALENLDPDSLTPRQALEWIYRLKSL 852