Pairwise Alignments

Query, 402 a.a., ABC transporter permease from Ralstonia solanacearum PSI07

Subject, 400 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 2e-28
 Identities = 103/408 (25%), Positives = 179/408 (43%), Gaps = 18/408 (4%)

Query: 1   MTRKKLAGALMAAGLGLAAS-GAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAIKMAI 59
           M R+ L  A + A   L+      +  + +      +  +SG +A   G+      ++A+
Sbjct: 1   MQRRTLLKASLTAAAALSLPLSIRSAFAAEPFTFYGLKSMSGAFASY-GKFADMGSRLAV 59

Query: 60  EDAGGKVLGKPIELITADHQNKADIAASKAREWMDQQGLDLLVGGTNSATSLAMSKVAAE 119
           +    +VLG+ +     D +  A  A  K +E + Q G     G T S+++LA++K   +
Sbjct: 60  QQHP-QVLGRALNYKVIDTEGNAGKAVRKVQEAIQQDGARFFQGCTLSSSALAVAKEVDK 118

Query: 120 KKRVFIGIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVK--QGGKSWFFLTADYA 177
              VF+    G   +T ++C   T  ++  T    + T   ++K     K W+ +T  Y 
Sbjct: 119 VGGVFM-TPVGADEVTGKDCNLATFRWSVPTYGAIRETMVPLIKLLPDAKRWYTITPQYV 177

Query: 178 FGHSLENDTAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQSSKAQILGLANAGGDTINA 237
           FG +L      V+K NG   +G+  H L   +FS YL  A ++K  +L L N G  + N 
Sbjct: 178 FGEALLEGAKNVLKENGLEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQSSNT 237

Query: 238 IKAAKEFGITKTMKIAGLLMF---INDVHSLGLQTAEGLLMTDSWYWDMNDA--TRKFAT 292
           ++ A  FGI + MK+  LL++   ++    LG    EG+ +  + YW   D    R+   
Sbjct: 238 LRQAVNFGIKERMKV--LLVWSAGLDQFQELGSDVLEGVYL-GAQYWHQVDTPLNRELVK 294

Query: 293 RYFAKMKKMPSSLQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTKIDDFYTKGTIRQ- 351
              A+    P+   AADY +    +  + A G+ D   V   ++    +    K +IR  
Sbjct: 295 LTQAQYGINPTYPLAADYISTKIMLDTIIATGSFDGPTVAKAMQGLSYEGPTGKESIRAG 354

Query: 352 DGRGIHDMYLMQVKTPAESKKPWDYMKIVATIPGEQAFTTPAESKCPL 399
           D + I D YL+  K  A+     D  K+++     Q+F     + C L
Sbjct: 355 DHQVIKDYYLLIGKATADMADKDDLAKVLS---AGQSFPPVEATGCTL 399